| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1082 |
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| Symbol | |
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| ID | 5709357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1134658 |
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| End bp | 1136478 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641275582 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_001540901 |
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| Protein GI | 159041649 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0746897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGGGTA ATCATGCGGT TGCTCATGCG GCATTAGAAG CGGGTTTAGC CGTTGCAGCA
GGTTACCCTG GTACGCCTAG TAGTGAGATT ATTGAGTACA TTATTGACCA CTCCAGGGAG
ACTGGGGTTT ATGTTGAATG GTCAAGCAAC GAGAAGGTAG CCTACGAGGT GGCTTACGGT
GCAGCATTAG CCGGTGCTAA GGCATTGGTT AGTATGAAGC ATGTTGGCTT AAATGTAGCG
ATGGATCCAC TAATGTCAAG CGCGTACACT GGTGTTAGGA ATAGTTTACT GGTTATTACC
GCTGATGACC CTGGAATGTG GTCAAGCCAG AATGAACAGG ATAATAGGTG GGTTGGTTTA
CACGCCCATA TTCCAGTAAT TGAACCATAC AGTCCACAGA ATGCAGCTGA CCTAGTTAAG
TTATCAATGA GTATGAGTCA ACGCCTCAAT CACCCAGTGT TAATGAGACT GGTTACTAGG
GTTTCCCACG TTAGGGAACC TGTTAAGGTC TGTGAATTCA GTAAACCTGA CTATGCCCAA
GGCTACCTCA AGGACCCATC ACACCACGCC TTAGTTCCAT CCAACGCTAG GCAACTTAAA
GGTGAGTTAA TTAAACGCTG GGAGAGTATT CAGTATGCCG TTGAGGATTT GCCTCACGAG
TACGTTAACG ATGGTAGAGT ACTGGTTATT ACGAGTGGTG TAGCGTATAA TTACGTTAAG
GAGGCTTTAA GGGACCTTGA AATCCCCGTT AGTACACTCA ACGTAATCAC CCCAGTACCC
CTACCTAGGA GGCTTATAGC TAATGCAGTG TCTAACTCAG ATAAGGTCGT GGTTGTTGAG
GAAGGTGACC CAGTGGTTGA GTTTCAGGTT AAGGAGGTGC TTTACGATGA GGGTATTAGG
GTTCCAGTGT ACGGTAAGGC TGAGGGTTTC TTCACCAGGG TTGGTGAATT AACACTAATG
AATGTTGAGG AGGGGTTGGC TAAGGCACTT GGTGTTGAAT TAAGGGGAAT GCGAAGTAAT
GCGCAACGCA TTGATGTACC ACCAAGGCCC CCTGTCTTCT GCCCAGGTTG CCCCCATGCG
GCATCATTCT ATGAGTTAAA GATAACCACG GCTAAGGCCA TGGTTAAGCC AGTCTTCAGC
GGTGACATAG GCTGCTACTC CCTAGGCATA AACCCACCCT TTAATGAGCA AGACGTGTTA
ACGAATATGG GTAGTTCAAT AGGCTTAGGC ATGGGTATCC TTAGAGGCAC TGGTGGTAGG
CAATTCATCA TAGCCATTAT AGGTGACTCC ACGTTCTTCC ACGCCGGTTT ACCAGCCCTG
GTTAATGCAG TCTACAATAA GGCGCCAATG CTTGTTATTG TTATGGATAA TAGGTTCACT
GCGATGACGG GTGGTCAACC AAGCCCAACG CAGGTCATTG ATATTGCCGC TGTAGCTAAG
GCAATTGGGG TTAAGTACGT GTACACAATT GACCCCTTCA ACGTTAAGGA GGCTGAGGCT
ACGTTAAGCG ATGCGTTAAG GAAGGTTAAG GATGGGGAAT TAGCCCTAGT GGTTATGAAG
AGGGCATGCG CCCTAGAGGC ATCAAGGGGG CGTAGTTCAC TCATTGTTAA ATTCACAGTG
GACCCCGATG CATGTAAGGC ATGCGGCATC TGCTACAATC TAATAGCCTG CCCAGCCATA
GCACCCCTTG AGAACAGGAA GGCTTGGATC GACCCCAATA TGTGCGTGGG ATGCTCAGTA
TGCGCTCAAG TCTGCCCTTA CAATGCAATA AAGCCCAGCG GTAATGCAAA GGAGTGGCTT
GATAAGTGGG CTGAAATGTG A
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| Protein sequence | MLGNHAVAHA ALEAGLAVAA GYPGTPSSEI IEYIIDHSRE TGVYVEWSSN EKVAYEVAYG
AALAGAKALV SMKHVGLNVA MDPLMSSAYT GVRNSLLVIT ADDPGMWSSQ NEQDNRWVGL
HAHIPVIEPY SPQNAADLVK LSMSMSQRLN HPVLMRLVTR VSHVREPVKV CEFSKPDYAQ
GYLKDPSHHA LVPSNARQLK GELIKRWESI QYAVEDLPHE YVNDGRVLVI TSGVAYNYVK
EALRDLEIPV STLNVITPVP LPRRLIANAV SNSDKVVVVE EGDPVVEFQV KEVLYDEGIR
VPVYGKAEGF FTRVGELTLM NVEEGLAKAL GVELRGMRSN AQRIDVPPRP PVFCPGCPHA
ASFYELKITT AKAMVKPVFS GDIGCYSLGI NPPFNEQDVL TNMGSSIGLG MGILRGTGGR
QFIIAIIGDS TFFHAGLPAL VNAVYNKAPM LVIVMDNRFT AMTGGQPSPT QVIDIAAVAK
AIGVKYVYTI DPFNVKEAEA TLSDALRKVK DGELALVVMK RACALEASRG RSSLIVKFTV
DPDACKACGI CYNLIACPAI APLENRKAWI DPNMCVGCSV CAQVCPYNAI KPSGNAKEWL
DKWAEM
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