Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1067 |
Symbol | |
ID | 5710412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1118788 |
End bp | 1119567 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641275567 |
Product | hypothetical protein |
Protein accession | YP_001540886 |
Protein GI | 159041634 |
COG category | [S] Function unknown |
COG ID | [COG1912] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0014432 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGTGTAA TAACCCTACT CACTGACTTC GGTAATGGGG ATTACTTCGT GGCATCAATG AAGGGGGTTA TACTGGGTAT TAACCCTAAC GTAACCATAA TTGATATAAC GCATGATGTA CCATCCTTCA ACATACGTAA GGCAGCATTC ATACTATGGG CAACCTACAG ATACTTCCCA AGGGGTAGTG TTCACGTTGC CGTCGTTGAT CCGGGTGTTG GAACCAGTAG GAGGGCTATT GCAGTAATGA GTAGGAATTA CTACTTCATA GGCCCGGATA ACGGTGTCTT AACCATGGCT GCTGAGGATG ATGGTGTATT GGAGGTTAGG GAGATAAGTA ATAGGGGGGT TATGTTGAGT GATGTTTCAT CAACATTCCA CGGTAGGGAT GTGTTTGCAC CCGCGGCGGC TTACCTTGGT TTAATTGATT TTAAGGATTA TGGACCATTA GTGAGTGATT ACGTTAAGTT AACCATGCCT AAGCCCGTTG AGAGGAATGG TGTAATTGAG GCCCAGGTGG TTTACGTGGA TAAGTTCGGT AACGTCTACA CCAGTGTTAG GAGGGGTATG TTTAACATAA ATTATGGCGA CTACATTACG GTTAACGTTA AGGGTAGGGG GATTAGGCTT GGGGTTAATA GGTCCTACGG GTACGTTAAC AAGGGTGAGG CCCTCGCCCT CTTTAATAGT ATGGGTTTCC TAGAATTGGC GATTAATGGG GGGAGTTTCT CCAGTGAGTA TGGGTTAAGT GAGGGTGATG TTATTCAGAT TGTTCGCTAG
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Protein sequence | MRVITLLTDF GNGDYFVASM KGVILGINPN VTIIDITHDV PSFNIRKAAF ILWATYRYFP RGSVHVAVVD PGVGTSRRAI AVMSRNYYFI GPDNGVLTMA AEDDGVLEVR EISNRGVMLS DVSSTFHGRD VFAPAAAYLG LIDFKDYGPL VSDYVKLTMP KPVERNGVIE AQVVYVDKFG NVYTSVRRGM FNINYGDYIT VNVKGRGIRL GVNRSYGYVN KGEALALFNS MGFLELAING GSFSSEYGLS EGDVIQIVR
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