Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1063 |
Symbol | |
ID | 5710135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1114388 |
End bp | 1115821 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641275563 |
Product | hypothetical protein |
Protein accession | YP_001540882 |
Protein GI | 159041630 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4930] Predicted ATP-dependent Lon-type protease |
TIGRFAM ID | [TIGR02688] conserved hypothetical protein TIGR02688 |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0757607 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.000125956 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGTGATC TTTATGTTAA GATTAGGAGG GCTTTTGGGG ATTATGCTGT GGATAAAAGC CTACTTCATG AGACGGAGAT ATCTAGGTTG CCGGGTTTTG TTGCTGAGTA TCTCATAACG GAGTTTGCGA TGGAGTATCC CAATGATTGG CAGACGAGGC TTAGGGAGTT CATTACACAG CATTATTTTG AGACCAGTGA AAAGGAGTAC CTTAAGCATA GGCTTATTGA GGAGAGGCGC ATTAAGATTA TAGATGAGTT AAGGGTTTGG GTGGATTTGG AGAGTGGTGA ACATAGGGGT GTAATTCAAT CCATTGGTGA GAGCGACATA AGAGTCCCAC CGGATATAGC CAGTAATTAT CCCATGACCA TGATTACAGG GATGTGGGGT CTCATTGAGC TTGAATACTC ACCTGAAACC GCTAAGAGGG ATATTAACGG AGAGCTTATA GAAAATCCAG TCATTGTGAC TGATTTCACA CCATTCCAGG CACCCACCTC GGATCCCAAG ATACTTGCTG AGGCCCGAGG TTACTTTACC TTTGAGGAGT GGCTTGATGT TCTCATAAAC ACCATTGGTT ATAATCACAA TGCTTACCCG GGTATTAGGA GGAAGCTTGT CCTCCTCTCA AGGCTCTTAC CGCTGGTGGA GGAGAATTTG CACATTGTAG AGTTTGGGCC TAAGGCCACT GGTAAGACTT ACGTGTTTAG GAATGTGAGT AGGTATACGA GGATTATCGT GGGTGGTATG ATAAGCCCAG CAGCCTTGTT CTACAACCTC AGGAATGGTA TGCCGGGCGA GATAGCCATT AGGGATTCTG TGGTATTCGA TGAGATATCC AAGGTCAGAT TCCCCAACCC TGATGAGATA GTTGCTAAAC TCAAGGACTT CATGGAGAGT AGTCAGTATG AGAGGGGTAA GCAGAGAGTT GCATCTGGTT CTTCTATAGT TATGCTTGGG AATGTAGAGG TTGAGGAGAG GGAGGGGGCT TACGTGCCCG TGGAGGACTT AACATACATA CTGCCAAAGC CCATGAGGGA CTCAGCCCTA ATAGATAGGG TTAGAGGGCT TATACCAGGA TGGGAACTCC CTAAAATAGG TATGGTTAAA TATCATTTGT CCCAAGGTTA TGGGATTGCT CTAGATTACT TCTCAGAAGC ATTACATACA ATGAGGAAGG AGACCTTAGT AGGTGAAGTT AGTAAGCATA TAGAGTTAAT GGGAGAGGTG ACGATTAGAG ATGAGAAGGC GATTAAGAAA ATGCTAAGTG CATTCATTAA ACTCCTCTTC CCAAACCTAG AATTTGATAA AAGAGAGTTG GATATAGTCA CTGGGCATGT AGTAGAACTA AGACAGAGAA TCAGAGATTG GATGCATAAG TTGTCTCCCT CAGAATTTCA AAGAGAGGAA TTATCATATA TTGTGAAAGG ATAA
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Protein sequence | MGDLYVKIRR AFGDYAVDKS LLHETEISRL PGFVAEYLIT EFAMEYPNDW QTRLREFITQ HYFETSEKEY LKHRLIEERR IKIIDELRVW VDLESGEHRG VIQSIGESDI RVPPDIASNY PMTMITGMWG LIELEYSPET AKRDINGELI ENPVIVTDFT PFQAPTSDPK ILAEARGYFT FEEWLDVLIN TIGYNHNAYP GIRRKLVLLS RLLPLVEENL HIVEFGPKAT GKTYVFRNVS RYTRIIVGGM ISPAALFYNL RNGMPGEIAI RDSVVFDEIS KVRFPNPDEI VAKLKDFMES SQYERGKQRV ASGSSIVMLG NVEVEEREGA YVPVEDLTYI LPKPMRDSAL IDRVRGLIPG WELPKIGMVK YHLSQGYGIA LDYFSEALHT MRKETLVGEV SKHIELMGEV TIRDEKAIKK MLSAFIKLLF PNLEFDKREL DIVTGHVVEL RQRIRDWMHK LSPSEFQREE LSYIVKG
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