Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1035 |
Symbol | |
ID | 5708940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 1086633 |
End bp | 1087742 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641275534 |
Product | saccharopine dehydrogenase |
Protein accession | YP_001540854 |
Protein GI | 159041602 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1748] Saccharopine dehydrogenase and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.002622 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGGGTTGA TTACCGTAGT GGGTTTGGGT CCAATGGGTA GGGCTGCCTC ATACTACTTG ATTAAGCACA CTAATCATGA GGTATTGGGT TACGATAAAT CCAGTGAGGC GGTTAATGCT GCATTAAGCC TGGGGATTAA TGCCGTTAAG GCTGATGCCA TGAATGATGA GGTCGCCAGG AGGATTGCCG GTGATTCTGA TGTAGTATTA ACCGCTGTGC CACAGTCCAT TGCCGATTCA CTGGTTTTTA AGCTTCATGA ATATGGGGCT AAGGTTATTG ATTTAATATT CCTATGGAGG TTTAATAGTG AAACCGCTGG GAGGGTTAGT AATGGATCCC TTGTAATACC GGCCTGCGGT TGGGCTCCAG GCTTAACCAA CCTACTTGCA GCTGCAGCAT CCTCAGAGTT GGATGCTGTT GAGGAGTTGG GGATTCATGT TGGTGGTAAT CCAGTGAACC CAAGGCCACC ACTGTACTAT GATGTGTTAT TCTCCGTTGA AAGCACCATT GAGGAGTACG TGAGGCCGGC CACAATTATG ATTAACGGTG AGTTAAAGAG TGTTGACCCA TTATCATCAA TATACCCGTT TAGGACCTGG CTCATTGACG GTGACTTCTC TGAATTCTAC ACCGACGGTT TATCAACACT AATCGTCACC ATGCCTAGGC GGTTTAAGTC AATTAAAACA ATGTATGAGA GAACCATTAG GTGGAGTAGG CACCTTGAGG TTATGAGGAT TCTTAAGGAT GTTGGCTTAC TGGGTAGTGA GGCATTGGTT AAATCCTTAA GCAGCATAAT GAGGCAGGGT GTTGAGGATT TCTCACTAAC TGTGGTGGAG GCTAGGGGTG TGATTAATGG TGAGCCTGCC AGGGTTGCCT TTGAGGGTAT TGATTACGCA AGGGGTGGCT TCACGTCAAT GGCTAGGTTA ACTGGGTTCA CAGCAGCCGT GGTAGCTGAC TTAGTGGCAA GGGGTGTGAT TAAGGGTAGT GGCTTGCTCC CAATTGAGGA GGCTTATTTT GAGAATAAGG ATGTATTGAG GCATGTTCTC AATGGACTTA AGGCTGAGGG CGTGAAGCTT ATGCTCACTA AAACAGTAAC CGCACCCTAG
|
Protein sequence | MGLITVVGLG PMGRAASYYL IKHTNHEVLG YDKSSEAVNA ALSLGINAVK ADAMNDEVAR RIAGDSDVVL TAVPQSIADS LVFKLHEYGA KVIDLIFLWR FNSETAGRVS NGSLVIPACG WAPGLTNLLA AAASSELDAV EELGIHVGGN PVNPRPPLYY DVLFSVESTI EEYVRPATIM INGELKSVDP LSSIYPFRTW LIDGDFSEFY TDGLSTLIVT MPRRFKSIKT MYERTIRWSR HLEVMRILKD VGLLGSEALV KSLSSIMRQG VEDFSLTVVE ARGVINGEPA RVAFEGIDYA RGGFTSMARL TGFTAAVVAD LVARGVIKGS GLLPIEEAYF ENKDVLRHVL NGLKAEGVKL MLTKTVTAP
|
| |