Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1014 |
Symbol | |
ID | 5710200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1064357 |
End bp | 1065610 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641275515 |
Product | citrate transporter |
Protein accession | YP_001540835 |
Protein GI | 159041583 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.460106 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.615622 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAGTATA GGTTCATTGC GGCGTCAATA GCCTTAATTA TAACATACAG CCTAATAGCG TTAAGGGGTG TGTCAAGGAG GTTTGACGTA CCAGCATGGG TAGCCATGCT AATTGGTGCA TCAATAATGA TAGCCACAGG AGTCGTAACA CCCAGTGAGG CCTTGGGTTC AATTAACCTA AACGTAATAA TATTCCTCTT CTCCCTCTTC ACAATAGCAT CAGCACTTGA GGTAAGCGGC TTCCTATCCT ACGTAGCCTA TAGGCTAGTA TCATCAAGCA GGAAAATGTA TAACCTGATA GGTAAAGTAT TCTTATCATC AGCAGTATTA AGCATGGTTA TTTCCAATGA TGGATTAGCA GCAAGCTTCA CACCGATGAT TATTGAGAGT GGTAAGGCGG CTGAAGGCAT TGATGTTAAG CCACTTCTAT ACGCCCTCGC CTATGGGGTT ACCATAGGCT CAGTGATGAT GCCCATTGGT AACCCGCAAA ACCTACTCAT AGCCATTGAA TCAGGGATAC CTAAACCATT CGTGAGCTTC ATTAAATACT TAGCAGTGCC AACGTTAATC AACCTGGCGG TAACATACAT CTTAATGCTC ATCCTCTTTA GGAAGAGGGC TATGGATGAC TTAGAGGTTA AGAGAGTAAA CATGAGGCTA AATGACCCAG CCTTATCTAA CTTAGCATTA GTAATCCTGG TAATTATTGT TGTAGTACTT GTTGCATCAG ACCTAGTTGG CTTAAACCTA GATGCGGCGT TAATCGCATT AATTGGGGCA ACTGTGGTTT ACGCCCTAAG TGATAGGAGG GGGGAGGTGT TGAGTAATGT GGATTGGCAG ACGCTGGTGT TCTTCATGGG ATTATTCATA GTAAGTGAGG GCGCTTACAC TTCAGGTGTT TTAAATTACC TGGCGCATGC ATTACCAGCA CCAACAACGC TCTGGGGCAT TTTCTTAGCA AGCATACTGT TAAGCCAAGT CATAAGTAAT GTACCCATGG TTGCATTATA CTTACCCTTA ATGACAAGCC TAGGTGTTGG GCCAGGGATG ATTAATGACT GGGTTGGCTT AGCTGCTGCA AGCACAATAG CAGGTAACTT AACGCTAATA GGGGCTGCAA GCAACATAAT AATACTGCAG GCAAGTGAGA AGAGGGGTGG TCCACGCTTC AGTTACGTGG AATTCCTACT CTACGGTATA CCAGTAACCC TAGTTAACGC CAGTATTTAC TACGCCTACT TGAAGCTCAT CTAG
|
Protein sequence | MEYRFIAASI ALIITYSLIA LRGVSRRFDV PAWVAMLIGA SIMIATGVVT PSEALGSINL NVIIFLFSLF TIASALEVSG FLSYVAYRLV SSSRKMYNLI GKVFLSSAVL SMVISNDGLA ASFTPMIIES GKAAEGIDVK PLLYALAYGV TIGSVMMPIG NPQNLLIAIE SGIPKPFVSF IKYLAVPTLI NLAVTYILML ILFRKRAMDD LEVKRVNMRL NDPALSNLAL VILVIIVVVL VASDLVGLNL DAALIALIGA TVVYALSDRR GEVLSNVDWQ TLVFFMGLFI VSEGAYTSGV LNYLAHALPA PTTLWGIFLA SILLSQVISN VPMVALYLPL MTSLGVGPGM INDWVGLAAA STIAGNLTLI GAASNIIILQ ASEKRGGPRF SYVEFLLYGI PVTLVNASIY YAYLKLI
|
| |