Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0763 |
Symbol | |
ID | 5708999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 794829 |
End bp | 795719 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641275265 |
Product | ABC transporter related |
Protein accession | YP_001540588 |
Protein GI | 159041336 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGCTG TAGAGTTCGC TAATGTTACT AAGCGTTTTA ATAAGATAGT TGCTGTTGAA AATATTAATC TTGTCGTCAA TGATGGTGAA GTAATAGCGC TAGTTGGTCC TAATGGTGCA GGTAAGACCA CGTTACTTAG AATGGCCGCA GGTGTTCTAC TGCCTGATTC AGGCAAGGTG CTTGTTTACG GTATTGAGGC TCATAGAGCT GAGGCTAAGC GCCACGTGGG CTTCATGACA CCCATGGATA GGGGTGTTTA CTGGAGGATT AGTGCATTAG ATAATTTAGT GTTTTTTGGA ACACTATATG GTTTATCCAT TAAGGAGGCT AGGAGAAGGG GTCTTGAGTT ACTTAGGGAA TTCGGCTTGG CTGAGAGGGC TAATGATTGG GTTGCAACAT ATAGTACAGG CATGATGAGG AGGCTTGAGT TGGCTAGGGC AATGATGCAT GACCCAGACA TACTGCTTCT TGATGAACCA ACCAGCGGTA TTGATGTTGA TGGTAAAAGA ATAATACTTG ACCACATAAG GAGGCTTAAG GGTAGGAAGA CGATAATAAT GGCTAGTCAT GACCCGCAGG AAATTGAGCT TGCTGATAGG GTTGTTTACC TGAATAGAAA CATAGTGAGT ACTTTACCAA CCCTTAAGAT TGTTAAGGTG CTTGTTAAGG GTGCTTTACC ATCATTAGAC GGATTCAGGA TTACTGATCT TGGTGATGGC AGTTACGTTA TTTATGCCAG TATTGATAAG TTTAATGACT TAATTAAGAA ATTAGCCTCA ATGGATGGTA ACCTCAGGGT AATTGATCTC AACGTTGAAG TTGCCTTCGC AGAGAGGAAT GCGAGGATTG AGGAAAGAAT GAATAGGAGG GGTGGTGGAC CATGGGTTTA G
|
Protein sequence | MPAVEFANVT KRFNKIVAVE NINLVVNDGE VIALVGPNGA GKTTLLRMAA GVLLPDSGKV LVYGIEAHRA EAKRHVGFMT PMDRGVYWRI SALDNLVFFG TLYGLSIKEA RRRGLELLRE FGLAERANDW VATYSTGMMR RLELARAMMH DPDILLLDEP TSGIDVDGKR IILDHIRRLK GRKTIIMASH DPQEIELADR VVYLNRNIVS TLPTLKIVKV LVKGALPSLD GFRITDLGDG SYVIYASIDK FNDLIKKLAS MDGNLRVIDL NVEVAFAERN ARIEERMNRR GGGPWV
|
| |