Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0672 |
Symbol | |
ID | 5708899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 708850 |
End bp | 710331 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641275174 |
Product | sugar transporter |
Protein accession | YP_001540502 |
Protein GI | 159041250 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAGTG AAGCAAGTAA TCCGAGCCTC CAAGATTTGC TTAGGATACT TGATAATAAT AGAGTCAATA AGTTTTACTG GCTAATCACT ATTTTAGCTG CTGTTGGAGG TTTCCTATTT GGCTACGACA CTGCAGCAAT TGGTACAGCT GAATTATTTG TACCATACCA CTATGAAGGA TTCCTACTTG GATACGAGGT TGCAAGTGCT TCACTTGGAG CAGCCATAGG GACGGTATTA GCATACTTTT ATACTGATAA ATACGGTAGG AAATCATTAC TCATAATTGA CGCGTTAATT TATGCATTGG CTGCAATAGG TTCAGCGTTA TCAGTGAATG GAATAATGTT ACTTATTATG AGGACTATAC TTGGAGTTGC CATAGGTGCT GATTCTGCTA TAGCAACAGC CTATATAACT GAGTATGCTC CTAAAGATAA GAGGGGTTCA TTAGCTATAA TGCAGCAGTG GATGATAACA ATAGGCATAT TGGGATCTTA CCTTATAGGT TCAGTAATCT TCTACATTGC ACCAGCCTTA GCTTATTCTC TTGGCTGGAG ACTGGTATTG GGTCTAGCAG CCGTACCCGC TATCATAGGT TTCGCCTTCA GGTTCATAAT GCCTGAATCC CCTAGATGGC TACTATATAC TGGTAAATTA GAGAGGCTGA AAATGGAGTT AAGGAAGTTC GGGTTCGATA TTAATGATCG GGATTTAGAG AGGCTTAGGG CTATAACTTT AACTGAGGTG AGGGAGGCAT CACTAGATAA TGCGGCTAAG AAGGCTCTTG TAGTGGTTGG CTTATGGTTA GTATTCCAGC AGATAACCGG AATAAATGTG CCATTTTACT ACGGACCTAT AGTTCTTTCA AAGCTTCACC TATTCGGTAC CACAGCGAAC CCGGTATATA GTAACATTTA TGCAGTACTG GAATCTGCAA TACTTGCCGC TATAAATGTG GCAGCCACAT TCATAGCCTT CAGATACATA GATAGAATCG GTAGAAGGAC ATTGGGGCTA TCAGCATATA TCGGTATGCT GATCTCCGAC TTAATAGGAG GCATTTCAGT AATTAAAGGC TTCCTACCTG GTGTACTTAT AGCATTTGCT GGGTTTATAA TATTCTTCGC ATACGGTGTT GGGGGTACTG GATGGCTTAT ACAGGCAGAG TACTTTGATA CGAGGATTAG GGGTAGGATG GCGGCAATAG GTGCATTAAT AGATTGGTTA GCAAACTTCG CGCTTATTGA AGTCTTCCCT GTTATGTTAT CCTCAATTGG ACTTGCCGGT AGTATGTTCA TTTTCGCGCT TCTCGATGTA GTAGCATTAG CCTTCGTTTA CTTATTTATG CCTGAAACCA AGGGATTATC TTTAGAGGAG GTGGTGGAAA TGTTTAGGCA AATACCATTT ACACAGTTGA GACACGGTAG GGAACTTATA ATCTCCGCGT TATCTCAGGA GAGGGGAAGC AGTGAAAACT AG
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Protein sequence | MSSEASNPSL QDLLRILDNN RVNKFYWLIT ILAAVGGFLF GYDTAAIGTA ELFVPYHYEG FLLGYEVASA SLGAAIGTVL AYFYTDKYGR KSLLIIDALI YALAAIGSAL SVNGIMLLIM RTILGVAIGA DSAIATAYIT EYAPKDKRGS LAIMQQWMIT IGILGSYLIG SVIFYIAPAL AYSLGWRLVL GLAAVPAIIG FAFRFIMPES PRWLLYTGKL ERLKMELRKF GFDINDRDLE RLRAITLTEV REASLDNAAK KALVVVGLWL VFQQITGINV PFYYGPIVLS KLHLFGTTAN PVYSNIYAVL ESAILAAINV AATFIAFRYI DRIGRRTLGL SAYIGMLISD LIGGISVIKG FLPGVLIAFA GFIIFFAYGV GGTGWLIQAE YFDTRIRGRM AAIGALIDWL ANFALIEVFP VMLSSIGLAG SMFIFALLDV VALAFVYLFM PETKGLSLEE VVEMFRQIPF TQLRHGRELI ISALSQERGS SEN
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