| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0576 |
|---|
| Symbol | |
|---|
| ID | 5709258 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 607332 |
|---|
| End bp | 607559 |
|---|
| Gene Length | 228 bp |
|---|
| Protein Length | 75 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641275077 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001540407 |
|---|
| Protein GI | 159041155 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.13517 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.00414823 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGTTTAAGT GTAGTTTATG TGGATTTGAG GTTCCCTTTA GTGAGGTCAT CTACATTAAG
GGTAATGTAG TTATCTGTAG AAGATGCTTC CCCACGTATT ACGTTAAGAA CTGTATCTTC
CTAAGGAGGA GGCTCATTGG GGAGAATCCA CAGGCCTGCT CCTTCTGCCA ATACAGGAAG
AATTGCGACT CATACATTGC TTCGCTCAAG GGTTCCCCTG AGGCCTAA
|
|---|
| Protein sequence | MFKCSLCGFE VPFSEVIYIK GNVVICRRCF PTYYVKNCIF LRRRLIGENP QACSFCQYRK
NCDSYIASLK GSPEA
|
|---|
| |