| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0520 |
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| Symbol | ubiA |
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| ID | 5709169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 553361 |
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| End bp | 554221 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641275024 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_001540355 |
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| Protein GI | 159041103 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.62584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGTTA GACGTATGAT TAACGAGTAC CTGAAGCTAA TGAAACCCCA CGTAATATGG
CTACTGGTGC TCTCGGCATT AGTTGGTTAC ATTGCTGCTG CAGGCCCATT GGTGAACCCC
ATTAAGTTAA TTGAATTAAC TGTGGTGGGT TTCCTATCCA CGGGTGGTTC AGCAGCCTTC
AACATGTATT ATGAGAGAGA TATCGATAGC CTAATGGTTA GGACAATGAA GCGTCCAATA
CCCAGTGGTA AAGTGACTCC ATTAAACGCC TTAACGTTCT CAATAGCCGT AAGCCTCAGC
GGCTTTACCT TATCTTACCT TTGGCTTGGA TCATGGGTAA CCTTAATGAT TGCACTAGGT
TGGTTCTTCT ACGCAGTTCT ATACACCATA ATGCTTAAGA GGAGGACATG GTTAAACATA
GTGATCGGCG GCTTCGCGGG GAATGCCGCA TTACTCTCAG GGTGGATTAT GGCTAAGCCC
ATTGACCTGG AGTCTATATT ACTATCAATG GTGATATATG TTTGGATCCC AGCCCATATT
TGGTCACTAG CCTACTACGC TAGGGATGAT TACAAGAGGG TTAACGTACC CATGCTACCC
ACCATGGTTA ATGAGAAGGC AAGCGTAAGA ATAATATCCA TACTTAACCT AGTATCTATA
ATATACATGC TGGTGCTTTA CCAATTATAC ATGGCTAAGT TAATAGGCTA TATCCTAGTT
ATACCGGCTA CACTTGCAGG AATCATAGTA ACCATTAAGG CCCTTATTAA GCCGAGTAAT
GAATCCTTCA GGACAATGTT CAAGGCCACG AGCCCAATCC TACTACTATT CCTACTAGCC
GTAATAATAT CAAGGATTTG A
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| Protein sequence | MSVRRMINEY LKLMKPHVIW LLVLSALVGY IAAAGPLVNP IKLIELTVVG FLSTGGSAAF
NMYYERDIDS LMVRTMKRPI PSGKVTPLNA LTFSIAVSLS GFTLSYLWLG SWVTLMIALG
WFFYAVLYTI MLKRRTWLNI VIGGFAGNAA LLSGWIMAKP IDLESILLSM VIYVWIPAHI
WSLAYYARDD YKRVNVPMLP TMVNEKASVR IISILNLVSI IYMLVLYQLY MAKLIGYILV
IPATLAGIIV TIKALIKPSN ESFRTMFKAT SPILLLFLLA VIISRI
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