Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0405 |
Symbol | |
ID | 5709513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 440014 |
End bp | 441303 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641274908 |
Product | IS605 family transposase OrfB |
Protein accession | YP_001540240 |
Protein GI | 159040988 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00105 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAGGA GTAACATTGT TAAACTGATT GTGGATGAAG AGACTAAGAA GAGGTTGCTT GGTCTATTGG AAGTGTATAG GGCTTGTTGG AATACTGTTA ATTGGCTTAG GATGCAGCAG TTTAAAAACC ATGAAAGAGT GGGCTTCGGA GAGACCGAGA AAGAAACATA TGAGAAGTTT AAGCGAATCC TAAAAGTCAA TGCACAGCAG GTTACTAGGA AGAATGCTGA GGCTTGGCGT TCATTTTTCG CTTTAATAAA AGAGAAGAGG CAAAACAAGA ACTTAAAGCC AAGACCGCCG GGCTATTGGA AGCAAGGCAT CATTCTTGTT AGAAATGATA GGTACACTAT TGATGAGGAG AAACGTGAGA TTTACCTTAA GGACTTCAAG ATGAGGTTAA AGTACGCCGG TAAGTTGAAA TGGAAAGGGA AACAAGGCAG ACTTGAAATA CATTATGATG AAGTTAGGGG GAGGTTTTAC GCATTCATAC CAATGAGTGT TGAGGACGTT AAACCAAAGG AGAGTGGATT AAAGGCATCT ATTGATTTAG GGATAGTGAA CTTAGTAACA ATGTTCATAG AGAATGGAAA ATGGTTTCTC TTCAAAGGTG GTTCTATTCT CTCACAGTAC GAGTATTATA GCAAAAAGAT AGCCATAACA CAGAAGAAAT TAGCCTTGCA TGGGCAGAGG AGGAGTAGGA GATTAAGCAT GTTATATAGG AAAAGAAGCC TATTCATGAG GCACGTAGTA AATTCAATGG TGAGGAGGAT AATGAATATA CTTAGTAAAG AGGGGGTTAT AGAGGTTAGA GTTGGTTACC CTAAGGAGAT TACAAAGAAC CATGGGAATA AACTAACTGT GAACTTCTGG AATTATAGGC TCATTATACG AAGGTTGAAA GAGGTTGGTG AGGAGTTGGG GATTAAGGTT ATTGAGGTTA ATGAAGCGTA CACATCTAAA ACATGCACCC TATGCGGGGA AACTCACCCA AATGGTAGGA TTCACCGTGG CTTATTCAAG TGTCCCCGCA TGGGGAAGGT AATTAATGCT GACTTGAATG CGGCAGTAAA CATACTACGC ATGCACATAT CCCCAAGTCC CAGTGAGGCG GGTGTTGGGG GCTACTCCCG TGGAGGGATA GGGGTAATTG GGTTGAAGAC CCAGCCCGTG GTCTACCGCT GGACGAACGG AGCGGGGTGG AGGTCATCCT CCACCAGCAA TGAAGCGATG AGGATGAAGG CGGTAAACCA CAAACCAATG AACCACCCAA AGGGAAACCC CACCCTTTAA
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Protein sequence | MKRSNIVKLI VDEETKKRLL GLLEVYRACW NTVNWLRMQQ FKNHERVGFG ETEKETYEKF KRILKVNAQQ VTRKNAEAWR SFFALIKEKR QNKNLKPRPP GYWKQGIILV RNDRYTIDEE KREIYLKDFK MRLKYAGKLK WKGKQGRLEI HYDEVRGRFY AFIPMSVEDV KPKESGLKAS IDLGIVNLVT MFIENGKWFL FKGGSILSQY EYYSKKIAIT QKKLALHGQR RSRRLSMLYR KRSLFMRHVV NSMVRRIMNI LSKEGVIEVR VGYPKEITKN HGNKLTVNFW NYRLIIRRLK EVGEELGIKV IEVNEAYTSK TCTLCGETHP NGRIHRGLFK CPRMGKVINA DLNAAVNILR MHISPSPSEA GVGGYSRGGI GVIGLKTQPV VYRWTNGAGW RSSSTSNEAM RMKAVNHKPM NHPKGNPTL
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