Gene Cmaq_0379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0379 
Symbol 
ID5708743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp413851 
End bp414360 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content43% 
IMG OID641274882 
Producthypothetical protein 
Protein accessionYP_001540215 
Protein GI159040963 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0157322 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.8362 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGATTA ATGAGAGGAA GCTAGCCATA GTTTCAGGCA TAGTGCTTGG GGAGGATTCT 
GAGACCGGTG TTAGCGTTAG GTTGAGTGAA TTGAGGCAGG TCTTATCTAA GAGGATTAGT
AATCCTGATG CGGTAATAGG GAAACTCGCA GAGGAGGGTG TGTTTAAAAT AGAGAGGATT
GGGGGTGGCT TCAGGGTCAT TATTCAATAC ACACCCGAGG TAAGGGGCAT ATATGGTTAT
GTGATTGAAT CCGTAATAAC CTTCGATGAC TTCATTAAGG AGTTAAATAA CGCAATAATG
AAATACGCCA ACCCAGCAAC AGGTTATGCA GACCTCGGTG TCGTTATGAA GCACGTATGC
AGTAGACTGG GTATAGGGGA TTTGGATTTC GATCAATTAT TCCTTAAGGC CATTAGGATT
AATGGGAGGA AGTATGTGTT GAGTTACGGT GGATCACATA GGGTTAAGGT TGGTTCAGGT
TACTATGGGT TAATTAAGGT GATTCCATAA
 
Protein sequence
MPINERKLAI VSGIVLGEDS ETGVSVRLSE LRQVLSKRIS NPDAVIGKLA EEGVFKIERI 
GGGFRVIIQY TPEVRGIYGY VIESVITFDD FIKELNNAIM KYANPATGYA DLGVVMKHVC
SRLGIGDLDF DQLFLKAIRI NGRKYVLSYG GSHRVKVGSG YYGLIKVIP