Gene Cmaq_0373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0373 
Symbol 
ID5710461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp408490 
End bp409836 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content47% 
IMG OID641274875 
Productmalate dehydrogenase 
Protein accessionYP_001540209 
Protein GI159040957 
COG category[C] Energy production and conversion 
COG ID[COG0281] Malic enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACT CCGGTGAGGA TCGAACAAGG AAGTGGTATG ATACGTCAAT TAAGGTTGCG 
AAGGAATACG GTGGTAAAAT CTCAGTAATG CCTAAGGTTC CCGTTACAGG CCTAAGGGAC
TTCTCAATAT ACTACACTCC TGGAGTCGCT GGTGTATCGC TTGAAATAGC CAAGAACTCT
GACCTATCCT TTGAATTAAC CTGGCGCTGG AACGCAATAG CAGTATTAAC TGATGGAACC
AGGGTACTGG GCTTAGGTAA TGTTGGACCT GAAGCAGCGT TGCCAGTAAT GGAGGGTAAG
GCGCTTATAT TCAAGTACTT AGGCGGCGTG GATGCTGTTC CACTTCCAAT TAGGGTTAAG
TCAAGGGAGG AGTTCGTAGC CGTAGCCAAA GCCATTGAAC CATCCTTCGG TGGAATAAAC
CTAGAGGATA TTGAGTCACC CAAGTGCTTC TACCTGTTGG AAACCTTAAG GAAGGAGCTT
AATATACCTG TGTGGCATGA TGATCAACAG GGGACTGCTG GCGCAATCCT GGCAGGCTTG
TTTAATGCCC TTAAGATTGT TGATAAGAAC ATTAACGATG TTAAGGTGGT GCTCTTCGGC
GCAGGTGCAT CAAACATAGC TGCAGCGAGA ATACTCCATG CAGCAGGCGT TAATTACGGG
AACATGATCC TCATAGATAG TAAGGGTCCA TTACACGCCG AGAGGGAGGA TATGGATAAG
CTGATGCTTA ATAACCCATG GAAGTACGAC CTAGCCCTTA AGACAAACAA GGAGAGGAGT
AAGACAATTG AGGATGCCAT GAAGGGTGCT GACGTATTAA TCTCAGCATC AACACCAGGG
CCTAATGTAA TTAAGAAGGA TTGGATTAAG GCAATGAATA AGGATGCCGT AGTCTTCGCC
TTAGCCAACC CAGTTCCTGA AATATGGCCA TGGGAGGCTA AGGAGGCTGG AGCCAGGATT
GTGGCCACTG GTAGGAGCGA TTTCCCTAAC CAAATAAACA ATAGTTTAAT CTTCCCATCA
GTCTTCAGAG GTGCCCTAGA TGTTAGGGCT AGGGGGATTT CAGATGAGGT TATTGTGGCT
GTGGCTAGGG AGATTGCTAA GTATGCTGAG GAGAAGGGGA TAACTGAGGA TTACATTATA
CCAACAATGG AGGAGTGGGA GGTTTACCCA AGGGCAGCGG CTGCGGCAGC CGTGGAGATT
GTTAAGGAGG GTTTAGCCAG AGTCACCACG ACTTATAATG AGGAGCTTGA GAGGGCTAGA
AGCATAATAG CTAAGTCCAG GGCATCAATG GAGAAGCTTA TGAGGGAGGG ACTTATAAAG
GAGCTTCCAG CTGAGTTAAT GAGGTGA
 
Protein sequence
MSNSGEDRTR KWYDTSIKVA KEYGGKISVM PKVPVTGLRD FSIYYTPGVA GVSLEIAKNS 
DLSFELTWRW NAIAVLTDGT RVLGLGNVGP EAALPVMEGK ALIFKYLGGV DAVPLPIRVK
SREEFVAVAK AIEPSFGGIN LEDIESPKCF YLLETLRKEL NIPVWHDDQQ GTAGAILAGL
FNALKIVDKN INDVKVVLFG AGASNIAAAR ILHAAGVNYG NMILIDSKGP LHAEREDMDK
LMLNNPWKYD LALKTNKERS KTIEDAMKGA DVLISASTPG PNVIKKDWIK AMNKDAVVFA
LANPVPEIWP WEAKEAGARI VATGRSDFPN QINNSLIFPS VFRGALDVRA RGISDEVIVA
VAREIAKYAE EKGITEDYII PTMEEWEVYP RAAAAAAVEI VKEGLARVTT TYNEELERAR
SIIAKSRASM EKLMREGLIK ELPAELMR