Gene Cmaq_0299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0299 
Symbol 
ID5708872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp338080 
End bp338823 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content44% 
IMG OID641274803 
Producthypothetical protein 
Protein accessionYP_001540137 
Protein GI159040885 
COG category[S] Function unknown 
COG ID[COG2014] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.135744 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAGA GTAGGGTTAT TGAAGCCTTA ATATCATACG CTAAGGAGAA TAATACTGAG 
GTTAAGAACG CAGTAATTGG TGTTTCCTGG ACCTGTGTCT ACTCAAGATA CTGCGGGGTT
TCAATGACCT ACCGTACCGG TAACGCTAGC GTTAGGGGTT TTGGTCACTT AGAGGAGATG
AGTGTTGGTG AATTAGCGGA GTACTTAAGG TCATGGAACC TCCTCGAGGC TAGTGTTGGG
TTAGCAGCAG TGAACTCGAT TATTGAACCT AAGGGTGATG CTGAGGTTAA TGGATTAGAC
CTAGCCTTAG AGTATGGTAA AGGTAAGAAG GTTGTTATGG TTGGTAGATT CCCTGGGTTT
ACAAGGTTTA AGGAGGTTGC AAGGGAGGTA GTTGTCCTGG AGCTTAACCC ATTCCTAATA
GATCCAGTTA ATGGGATTCT ACCCTCCACT GCAGCTGAGA CTGTTATTGA GGATAGTCAA
GTGGTGGTTA TTACGGCGTC AACAATAATC AATAAATCAA TTGATAGGTT ACTGGAATTG
GCTAAGAGGA CTAATGCCTA CGTTATTCTA CTTGGCCCAA GCACTCCGAT GCTTGACTTA
ATGTTCGACT TTGGAATCGA CTTACTGGCT GGTGTAAGGG TTAATAACCC ATACTCATTC
ATGAAGAAGA TCAGTCAGGG GTGTGGGATG ATAAGTCCAG AGAGGATGGA GGGTGACGTA
AGCTTTATTG TTAAGGCTCG TTAA
 
Protein sequence
MPKSRVIEAL ISYAKENNTE VKNAVIGVSW TCVYSRYCGV SMTYRTGNAS VRGFGHLEEM 
SVGELAEYLR SWNLLEASVG LAAVNSIIEP KGDAEVNGLD LALEYGKGKK VVMVGRFPGF
TRFKEVAREV VVLELNPFLI DPVNGILPST AAETVIEDSQ VVVITASTII NKSIDRLLEL
AKRTNAYVIL LGPSTPMLDL MFDFGIDLLA GVRVNNPYSF MKKISQGCGM ISPERMEGDV
SFIVKAR