Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0299 |
Symbol | |
ID | 5708872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 338080 |
End bp | 338823 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641274803 |
Product | hypothetical protein |
Protein accession | YP_001540137 |
Protein GI | 159040885 |
COG category | [S] Function unknown |
COG ID | [COG2014] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.135744 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTAAGA GTAGGGTTAT TGAAGCCTTA ATATCATACG CTAAGGAGAA TAATACTGAG GTTAAGAACG CAGTAATTGG TGTTTCCTGG ACCTGTGTCT ACTCAAGATA CTGCGGGGTT TCAATGACCT ACCGTACCGG TAACGCTAGC GTTAGGGGTT TTGGTCACTT AGAGGAGATG AGTGTTGGTG AATTAGCGGA GTACTTAAGG TCATGGAACC TCCTCGAGGC TAGTGTTGGG TTAGCAGCAG TGAACTCGAT TATTGAACCT AAGGGTGATG CTGAGGTTAA TGGATTAGAC CTAGCCTTAG AGTATGGTAA AGGTAAGAAG GTTGTTATGG TTGGTAGATT CCCTGGGTTT ACAAGGTTTA AGGAGGTTGC AAGGGAGGTA GTTGTCCTGG AGCTTAACCC ATTCCTAATA GATCCAGTTA ATGGGATTCT ACCCTCCACT GCAGCTGAGA CTGTTATTGA GGATAGTCAA GTGGTGGTTA TTACGGCGTC AACAATAATC AATAAATCAA TTGATAGGTT ACTGGAATTG GCTAAGAGGA CTAATGCCTA CGTTATTCTA CTTGGCCCAA GCACTCCGAT GCTTGACTTA ATGTTCGACT TTGGAATCGA CTTACTGGCT GGTGTAAGGG TTAATAACCC ATACTCATTC ATGAAGAAGA TCAGTCAGGG GTGTGGGATG ATAAGTCCAG AGAGGATGGA GGGTGACGTA AGCTTTATTG TTAAGGCTCG TTAA
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Protein sequence | MPKSRVIEAL ISYAKENNTE VKNAVIGVSW TCVYSRYCGV SMTYRTGNAS VRGFGHLEEM SVGELAEYLR SWNLLEASVG LAAVNSIIEP KGDAEVNGLD LALEYGKGKK VVMVGRFPGF TRFKEVAREV VVLELNPFLI DPVNGILPST AAETVIEDSQ VVVITASTII NKSIDRLLEL AKRTNAYVIL LGPSTPMLDL MFDFGIDLLA GVRVNNPYSF MKKISQGCGM ISPERMEGDV SFIVKAR
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