Gene Cmaq_0184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0184 
Symbol 
ID5709205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp219387 
End bp220298 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content44% 
IMG OID641274687 
Productdihydropteroate synthase 
Protein accessionYP_001540023 
Protein GI159040771 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0294] Dihydropteroate synthase and related enzymes 
TIGRFAM ID[TIGR01496] dihydropteroate synthase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.875168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.154006 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTTA AATTAAATGC ACCTGAGGTT ATGGCAGTCA TTAACGTAAG CCCCGAATCC 
TTTTACTCAG CAAGTGTTAA ATCAACTGAA GAGGAGTTGC TTAAATTCGC CATTAATGTG
TTTAAGGCTG GTGTAAGGAT CTTTGACATT GGGGGAATGT CCACTGCGCC ATTTAAGAGA
ACTTGGGTTC CTGAGGATGT TGAGTTAAGT AGGCTTAAAT GGGCAGTAAA CCTACTGAGG
GGGGAGTTGG GTGATAGGAT TATCATATCT GTGGACACCT TCAGGCCACG TGTAGCCTCT
GAGGTGGCTA AATTAGGTGT AGATGTTTTG AATGATGTGA CTGGTTTAAG GTATGATAAG
GGGTTGGCTA AGGTGGCTAA GGAGCATGGA TTAGCCATGA TACTGTGCGC AAGGGAGGCT
ACTCAAAGTG GCTTAAATCC CGTTGAAGCT ATTATTAATG AGGCTAAGTG GAGTATTAAT
GTTGCTGAAT CCATGGGTGT TAATGATATT ATAATCGACC CATGCATAGG CTTCCCACCA
CTTGATAGGG ACCAGAACCT GGAGCCGAAT AGGCAGGTAC CTAATACGCG TTACGATGAC
TGGCCCTATA GGGATATTTA CCTTGTTGCT AACGCCGCAA GGATAAGGAG GGAACTTGGT
AAACCTATTT GCGTTGGCGT ATCAAGGAAG GGATTCATAA GGAGGCTACT GGGTGGTGGT
GTTGAGGATT CCATATGGGG AACACTGGGG CTTCACGCAT ACTTGGCCTA CGTGGGTGTG
GATGTAATTA GGGCTCATGA TGCAGTGGAG ACTCTTAATG TTGTTAAAAT TATTAATATG
GTGAAGGAAT GTGGTGGTGA TTATTTAAGC TGCATTGATA ACGTGAGAAA AGCTTATAAA
GAGGCTGATT AA
 
Protein sequence
MRLKLNAPEV MAVINVSPES FYSASVKSTE EELLKFAINV FKAGVRIFDI GGMSTAPFKR 
TWVPEDVELS RLKWAVNLLR GELGDRIIIS VDTFRPRVAS EVAKLGVDVL NDVTGLRYDK
GLAKVAKEHG LAMILCAREA TQSGLNPVEA IINEAKWSIN VAESMGVNDI IIDPCIGFPP
LDRDQNLEPN RQVPNTRYDD WPYRDIYLVA NAARIRRELG KPICVGVSRK GFIRRLLGGG
VEDSIWGTLG LHAYLAYVGV DVIRAHDAVE TLNVVKIINM VKECGGDYLS CIDNVRKAYK
EAD