Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0065 |
Symbol | |
ID | 5709601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 79548 |
End bp | 80807 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641274568 |
Product | translation-associated GTPase |
Protein accession | YP_001539909 |
Protein GI | 159040657 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0012] Predicted GTPase, probable translation factor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAATCA ACAGCAAAGC TTTAATTAAA CCTAAACCAT ACTTAATAGT GCTCACTCAA ACGCACGTGC AGGTTGGTAT TGTTGGGAAG CCTAATGCCG GGAAGTCAAC CTTCTTCGCT GCATCAACCT TAATTGATGT TAAGATTGCG CCTTACCCAT TCACTACAAT TGAACCTAAC GTGGGTGTGG GTTATGTTAC AATACCATGT GTTTGCAGGG ACCTTGGGGT TAAGGACAAT CCAAGGAATT CAATATGCAT GGATGGGACT AGGTTAATTC CAGTGGAGTT AATTGATGTG GCAGGCCTAG TACCTGGTGC ATGGCAGGGT AGGGGTCTTG GCAACCAATT CCTAGACCAC CTCAGGAGGG CGCCTGTACT GATTCATGTT GTTGACGCCT CAGGTGGTAC TGATGAGGAG GGTAGGATTG TTAAGCCTGG TACTCATGAT CCCCTACTTG ATGTTAAGTT CCTTGAGAAT GAGGTCGACA TGTGGATGCT TCAGATAGTT AAGAAGGAGT GGGATAAGGT GGTTAGACAG GTGGAGTACT CTAAGCAGAA GATCGAGGAT GTACTCTACA GTATGTTAAG TGGATTAGGC ATAACTAGGG CTATTATTGA GGAGGCTTTG ACTCAATTAT CATTAATTAA TAAGCAACCG CATTTATGGG GTGAGGAGGC TATTATGGGT CTTGTAAAGT ATATTAGATC CATCGGTAAG CCCATGGTTA TTGCAGCCAA TAAGGCTGAT ATACCTGAGG CTGAGGATAA CATAAAGAGG ATGATTAATG AACTTAAGGG GTATAGGGTA ATACCAACTA GTGCTGATGC CGAGTTAGCG TTGAGGAGAG CGGCCAATAA GGGTTTAATA AAGTACATTC CCGGGGATCA AGACTTCACA ATAGTAGGTA ACCTAATGCC TGAGCAGGTT AAGGCCCTTG AGAGAATTAG GTCAATTATG AGGAAATGGG GTGGAACCGG GGTTGTTAAG GCCCTTAACA CAGCGGTGTT TGATGTGTTA GGCATGATAG CTGTTTACCC AGTGGCCGAT GAGAAGAGGC TAACTGACAC TGAGGGTAGG GTCCTACCTG ACGTATACCT GCTTCCCAGG AACGCAACTG TACTTGACTT AGCATCAGCA ATACACAGTG ATATTGCTAA GAGGGCTATG TTTGCTGTAG ATGCCTTAAG TGGTAGGAGG ATTGGCCTTA ATGAGAGGCT TCAGCATAGA TCTATTGTAA GAATTGTGAC CACTAGGTGA
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Protein sequence | MIINSKALIK PKPYLIVLTQ THVQVGIVGK PNAGKSTFFA ASTLIDVKIA PYPFTTIEPN VGVGYVTIPC VCRDLGVKDN PRNSICMDGT RLIPVELIDV AGLVPGAWQG RGLGNQFLDH LRRAPVLIHV VDASGGTDEE GRIVKPGTHD PLLDVKFLEN EVDMWMLQIV KKEWDKVVRQ VEYSKQKIED VLYSMLSGLG ITRAIIEEAL TQLSLINKQP HLWGEEAIMG LVKYIRSIGK PMVIAANKAD IPEAEDNIKR MINELKGYRV IPTSADAELA LRRAANKGLI KYIPGDQDFT IVGNLMPEQV KALERIRSIM RKWGGTGVVK ALNTAVFDVL GMIAVYPVAD EKRLTDTEGR VLPDVYLLPR NATVLDLASA IHSDIAKRAM FAVDALSGRR IGLNERLQHR SIVRIVTTR
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