| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0051 |
|---|
| Symbol | |
|---|
| ID | 5709079 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 67502 |
|---|
| End bp | 68533 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641274554 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001539895 |
|---|
| Protein GI | 159040643 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.118613 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGTTCA GTGAGGGCTT GAACGTAATT GTCGGTCCCC CTTCCAGTGG GAAGTCATCA
ATGCTTGAGG CGATTACACT CATAATGCAG TCAAGGGGTG AGGATGCATT AATTATTGAA
GGTAGGTTAT TAATGATTCA TGATGTGGTT GATGTGTTAA GGAACCTGGA TACCAGTAGT
AGGGTTACTG TTAGCCTAAG GTTCAGTATT GATGATCAGA TTTCAAGTTT CCTAAAGGAT
ACTGGCATTA ATGCTAATTC AGGGAGCATA ACCTATAGTT ACAGTTTTAT TCACTCCTCA
GGTAATGTTG AGCAGGAGGT TTGGCTTAAT GATAATCTCT TAGTTACCTT CGGTAGGATT
AATGATAAGA ACATGATACT TAAGCCTGAA ATCATAGACT TATGCATAAC CCCATACCAC
ATTATGCATG AAGATGCCTT AGAGACATGC AGTGATCCAC CTGATTCAGT TAAGGTGGCT
AAGGCCGTCT TATTCTCACT AAGACAGGGA TTAAGAGATA GGTTCTTCTT CATAGGGGAG
AATAGGTTAG CATGGTGGAA GAGGACCTTT GAAACAACAG TTGACTTACT ACCAGATTAC
TCAGTGGGTG GTGATGCACA GTATACTGTT CACCAATTAT CAAGAATGCT CACTGTACCA
AGCTATAGGG AGCAGGTTAA GGAAATTCTG AGCGAGATGC AGTCCTTAAA TGTTGAGGAT
GTAACAGCCG GCTTCATAGC ACCTAATAGG TTAATGGGTT TCATAAAGGC TAAGGGATCA
TGGGGGGTAC TCTACAATGC TGGGTTAGGG GTAAGGTCAA TACTACCGCT TATCGTTCAA
TTAGTCCTAG CCCCCAGAGG CTCCACTATA ATAATTGATG GAGTGGACAT AGGGCTTAAT
GAGGAATCAC TGGAAAACGT ATTAAGTGCA GTGGGTAAGT ATGCTAAATC TAAGGATCTT
CAGATAATAG CCTCAAGTAG ACTAAGGCCG AGGGTAAATG ATGCAAAGGT AATTGAGTTG
AATAATCAAT GA
|
|---|
| Protein sequence | MEFSEGLNVI VGPPSSGKSS MLEAITLIMQ SRGEDALIIE GRLLMIHDVV DVLRNLDTSS
RVTVSLRFSI DDQISSFLKD TGINANSGSI TYSYSFIHSS GNVEQEVWLN DNLLVTFGRI
NDKNMILKPE IIDLCITPYH IMHEDALETC SDPPDSVKVA KAVLFSLRQG LRDRFFFIGE
NRLAWWKRTF ETTVDLLPDY SVGGDAQYTV HQLSRMLTVP SYREQVKEIL SEMQSLNVED
VTAGFIAPNR LMGFIKAKGS WGVLYNAGLG VRSILPLIVQ LVLAPRGSTI IIDGVDIGLN
EESLENVLSA VGKYAKSKDL QIIASSRLRP RVNDAKVIEL NNQ
|
|---|
| |