Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_2518 |
Symbol | |
ID | 6355137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 2757198 |
End bp | 2758646 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642670106 |
Product | RNA methyltransferase, TrmA family |
Protein accession | YP_001944515 |
Protein GI | 189347986 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.391256 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCGTA TGGAACAGAC TGCCCTGAAA AAAGGTGACG TTATAGAGTT GACGGTTACC GATTTTGCCG ACAAGGATCG CTGTTTCGGA CGTCTTGATT GTGGTATCAG CGTAATGGTC ACCGGAATGC TGGCTCCAGG CGACCGGGTG AAAGCCCTTA TCAGAAAGGT GAAGCAACGC TATATCGACG CTTCAGCCGT TGAAGTGACG ATGTCGTCTC CCGACCGGGT AGAACCGGTA TGTTCATATT TCGGGGTTTG CGGAGGGTGT AAGCTCATGC ATATCTCATA CGAGGCGCAG TTGCGTTACA AGCGGAAAAA GGTCATTGAC GATCTTGTAC ATATCGGAGG TTTTACCGAT CCTCCCGTAC ATCCCGTGCT CCCTGCCAGG CACTCCTGTC ATTACCGCAA CAAGGTCGAG CTTTCCTGTT CGAGTATCCG TTATCTTATG CCGGAAGAGC TTTCGCAGGA GGAGCTTTCC CGTTCGAGGG ATTTCGGTCT GGGGTTTCAT GCTCCGGGAA ACTACGAGAA GGTGATCGAC ATCGACTACT GCTATCTGGC CAACGAGCCG ATGAACAGCG CGGTCAGGCT GACCCGTGAA TTTGCTCTCG CCAATCGCCT TGCCCCTTAT GCTGTCAAAG CGCATGCAGG CTTTCTGCGC AATCTGGTAC TGCGCACAAG CGAATATACC GGGAGGCTGA TGGTCAATAT CGTTACTTCA TGGCATGACC GCGAATTGAT GGCCCGTTAT GCAGATATGC TTGTTGCTGC GCTTCCGGAT CAGGATCTGA CGGTTGTAAA CAATGTCACG ACAAAAAAGA ACACGGTTGC TACAGGTGAG CAGGAGTTCG TGGTTTACGG GGAGGGTGCG CTGACGGAAC GGCTTGGCGA ACTCGATTTC AGGGTATCTG CGAATTCGTT TTTCCAGACA AACTCGTCAC AGGCAGCAGT TCTCTACGCT GAGATCCTCA AAGTGGCGGG AATCAGGCCG GATGATACCG TTTATGATCT TTACTGCGGG ACCGGCACCA TAACGCTCTA TCTTGCAAGG CATTGTCGGA TGGCGGCAGG GTTGGAGGTT GTAGAGAGTT CACTCAGTGA TGCGGCAAAG AACGCCGATT TGAATGGCAT CACCAATGCT GTGTTTTTTC AGACAGATCT GAAAGATTTT CATGCTATGC TTCAGAAACT TGAAAATTAT GATGCTCCTG GTGTTATTGT GACGGACCCT CCAAGAGCGG GCATGCATCC GAAAGCTCTT GAAACCATGC TCAAACTCAG AGCCCGTACG ATCGTCTATG TGAGCTGCAA TCCTTCGAAT CTTGCCAGAG ACGGCAAGGA GATCTCCCGT TACGGATACC GGTTGGTTTC AGTGCAGCCG GTCGATATGT TTCCTCACAC GGTGCATGTA GAAAGCGTTG CCTGTTTCGA GAGGATCGAT CATTACTGA
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Protein sequence | MIRMEQTALK KGDVIELTVT DFADKDRCFG RLDCGISVMV TGMLAPGDRV KALIRKVKQR YIDASAVEVT MSSPDRVEPV CSYFGVCGGC KLMHISYEAQ LRYKRKKVID DLVHIGGFTD PPVHPVLPAR HSCHYRNKVE LSCSSIRYLM PEELSQEELS RSRDFGLGFH APGNYEKVID IDYCYLANEP MNSAVRLTRE FALANRLAPY AVKAHAGFLR NLVLRTSEYT GRLMVNIVTS WHDRELMARY ADMLVAALPD QDLTVVNNVT TKKNTVATGE QEFVVYGEGA LTERLGELDF RVSANSFFQT NSSQAAVLYA EILKVAGIRP DDTVYDLYCG TGTITLYLAR HCRMAAGLEV VESSLSDAAK NADLNGITNA VFFQTDLKDF HAMLQKLENY DAPGVIVTDP PRAGMHPKAL ETMLKLRART IVYVSCNPSN LARDGKEISR YGYRLVSVQP VDMFPHTVHV ESVACFERID HY
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