Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_2504 |
Symbol | murD |
ID | 6355123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 2742903 |
End bp | 2744300 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642670092 |
Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
Protein accession | YP_001944501 |
Protein GI | 189347972 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0034683 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGTAC ATGGCAAAAA AGCATCGATT ATCGGTGCAA AACGGAGCGG TGTCGCTGCA GCGGAATTGC TTGCAAAGAG CGGCGCAAAG GTGTTCGTGA GCGAACTTGG TGAGCCGGGA GCTTCCGAAG CGGAGCGTCT TGCCGATTGT GGCATTCCCT GGGAGCAGGA TGGGCATACC GACAGGGTTT GCGATGCGGA TTTTTGTGTC GTCAGTCCAG GCATTCCCCG AACAGCAGGA ATTATCCGGC GGGTCCTTGA ACAGGGCATT CCTCTTTACA GTGAGATCGA GGCCGCGAGC TGGTTCTGCA AGGCAAGAAT TGCAGGTATT ACCGGAACGG ACGGCAAGAC CACCACGTCC ACGCTTCTGC ACCGCATAGC TGAAGCCGAT GGCATGAAAA ACGACTACAG GGCTTTCAGC GTCGGAAACA TCGGTGTGCC GTTTTCTTCT CTGGTGCTGG ATATGGCTCC CGCTGATCTT GCGGTTGTCG AGTTGAGCAG TTATCAGCTT GAAGGCTGTG AAACCTTCAG GCCGGATGTT TCGGTTATCA CGAACATCAC TCCCGATCAT CTCGATCGTT ATAACGGCGA TATGCAGTTG TATGCCGCAG CAAAATTCAG GATTTACGCT TCACAGCGCG CCTCGGATAC TCTGGTGTAC AATTTTGACG ACCCGTTGCT CCGGGCTCAA TTCAGCGGAA ATGGCAGGGG ATTTCCTTTT CGTATCGTTC CGTTCGGCAT CGGTAACGAT GTGCCCGGAT CCGGTTCGGA GGAGGCATTC TTTTATGACG AAGGGATGAT TCGGCATTTG ACCGCAAAAG GGATTTCGGA GGTTTTTTCG GGGGAGGATT TTCTGAAAAG CAGTTTCAGG GGCCGTCATA ACATCTATAA TGCCCTTGCT GCGCTTGCTG CGGCCGCAGC GCTCGGCATT GAAGAGAGCG TTGCCCGCAA GGCGATTTCA GGGTTTTCCG GCGTTGAGCA TCGACAGGAG TTCGTGTGCT CTCTTGACGG AGTCGAATGG ATCAATGATT CGAAGGCAAC CAATGTCAAT GCGCTTCTGC AGGCGCTCGA TGCCGTTCCG GGCAGTATTG TTCTGATTGC GGGAGGAAGG GATAAAGGGA ACGATTATAC GGTTCTTTTC GATGTCGTTC GGCGGAAAGT AGTGACGGTG ATTGCCATAG GAGAAGCAAG AGAAAAGATT TTACAGGTAT TTGAGGGGAT AACCCGTACT GCAGGAGCTG ATACTCTCGA TGACGCGGTA GCTCTCGCAC GGGAATCTGC CGAAAAAGGC CAGACGGTGC TTTTTTCTCC CGGCTGTGCC AGTTTCGATA TGTTTGAGAA TTTTGAAGAA CGGGGGCGAC TTTTCAAGCG CTCTATTCTT GCTTTGAACC CATGTTGA
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Protein sequence | MDVHGKKASI IGAKRSGVAA AELLAKSGAK VFVSELGEPG ASEAERLADC GIPWEQDGHT DRVCDADFCV VSPGIPRTAG IIRRVLEQGI PLYSEIEAAS WFCKARIAGI TGTDGKTTTS TLLHRIAEAD GMKNDYRAFS VGNIGVPFSS LVLDMAPADL AVVELSSYQL EGCETFRPDV SVITNITPDH LDRYNGDMQL YAAAKFRIYA SQRASDTLVY NFDDPLLRAQ FSGNGRGFPF RIVPFGIGND VPGSGSEEAF FYDEGMIRHL TAKGISEVFS GEDFLKSSFR GRHNIYNALA ALAAAAALGI EESVARKAIS GFSGVEHRQE FVCSLDGVEW INDSKATNVN ALLQALDAVP GSIVLIAGGR DKGNDYTVLF DVVRRKVVTV IAIGEAREKI LQVFEGITRT AGADTLDDAV ALARESAEKG QTVLFSPGCA SFDMFENFEE RGRLFKRSIL ALNPC
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