Gene Clim_2501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_2501 
SymbolmurC 
ID6355120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2739202 
End bp2740602 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content52% 
IMG OID642670089 
ProductUDP-N-acetylmuramate--L-alanine ligase 
Protein accessionYP_001944498 
Protein GI189347969 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01082] UDP-N-acetylmuramate--alanine ligase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCTTG GAAAAACCAG ACGGATACAT ATCGTAGGAA TCGGCGGTGC CGGCATGAGT 
GCGATAGCGG AACTGCTGCT GAAATCAGGA TTCGACGTGT CCGGTTCGGA CCTTCAGACA
GGAGAAGTGA CCGACAAGCT TGCCGAGCAT GGCGCGATTA TCTACAGGGG CCACAGCGCC
GGCCACATTG AGGGATGCGA TGTTGTCGTC TACTCCTCTG CAGTGAGAAA GGACGAGAAC
GTTGAAATAT CTGCAGCTGA AAAGGCCGGA ATTCCCGTAA TCAAGCGCGA TGAGATGCTT
GGCGAGCTCA TGCGTTACAA GTATGGCATA TGCATATCGG GCACCCATGG AAAAACCACC
ACAACGGCCA TGATTGCCAC CATGCTCATG GAGTCCGGCG AGTCTCCTAC CGTGATGATC
GGCGGCGTTT CAGACTATCT CGGGGGCAGT ACCGTTGTCG GGGAGGGGAA GTACATGGTG
ATTGAATCCG ATGAGTATGA CCGGGCATTT CTCAAGCTGA CGCCAACGAT CGCTCTGGTC
AACAGTCTTG AATCGGAGCA TATGGATACC TATGGAACGC TTGAAGAGTT GAAAAACGCG
TTTATCGCTT TTGCCGACAA GGTTCCGTTT TACGGACGGG TTATCTGCTG CGTGGACTGG
CCTGAAATCA GGAAGATCAT TCCCATGCTC AATCGTCGAT ATACGACGTT CGGGATAGAG
GAGCATGCCG ATGTTATGGC TTCGGATATT GTTATGGAGA AGAACCATAC GGTTTTTACC
ATCACGGCGT TCGGCAGCAG ATATGAAGGG GTAAGGCTGC ATGTTCCCGG CAGGCATAAT
GTGCTTAACG CTCTTGCTGC GTTTTCTGCA GGTATTGAAC TGGAAATCGC TCCTGAAAAG
CTTATTGCCG GACTTGGGTG TTACAGCGGG ATGCGGCGAA GGTTTCAGAT TCGCTATGAT
AACGGTCGAG GTCTTATGAT TGTCGATGAC TATGCCCACC ACCCTTCAGA GGTAAAGGCA
ACCGTCAGCG CGGCCAAAAA CGGATGGGCG GATTCGCGGA TCATTGCCGT TTTTCAGCCG
CACCTGTTTT CAAGAACGCT GGAGTTTGCC GATGAATACG GATGGGCGCT TTCGCGTGCC
GACAGCGTTA TTATTGCCGA AGTCTACCCT TCCCGTGAAA AAGCCGAAAA TTTTTCCGGC
GTGAACGGAA ATCTTGTTGC TGAAGCGGTC AGGAGGGCCG GAGGAAAACA TGTCGAGTAT
ATCGAGGGAC GCGAAACGCT GTCCGGCTCT TTGCGGGAGC ATTGTTCCGA CGGCAATATG
CTGCTTTTCA TGGGTGCGGG AGATATTACC CATATGGCTT CCGGGCTTGC AGAAGAGCTT
CGGAACGGTT CTGTAACATA A
 
Protein sequence
MELGKTRRIH IVGIGGAGMS AIAELLLKSG FDVSGSDLQT GEVTDKLAEH GAIIYRGHSA 
GHIEGCDVVV YSSAVRKDEN VEISAAEKAG IPVIKRDEML GELMRYKYGI CISGTHGKTT
TTAMIATMLM ESGESPTVMI GGVSDYLGGS TVVGEGKYMV IESDEYDRAF LKLTPTIALV
NSLESEHMDT YGTLEELKNA FIAFADKVPF YGRVICCVDW PEIRKIIPML NRRYTTFGIE
EHADVMASDI VMEKNHTVFT ITAFGSRYEG VRLHVPGRHN VLNALAAFSA GIELEIAPEK
LIAGLGCYSG MRRRFQIRYD NGRGLMIVDD YAHHPSEVKA TVSAAKNGWA DSRIIAVFQP
HLFSRTLEFA DEYGWALSRA DSVIIAEVYP SREKAENFSG VNGNLVAEAV RRAGGKHVEY
IEGRETLSGS LREHCSDGNM LLFMGAGDIT HMASGLAEEL RNGSVT