Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_2442 |
Symbol | sdhA |
ID | 6355913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 2676468 |
End bp | 2678408 |
Gene Length | 1941 bp |
Protein Length | 646 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642670032 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | YP_001944442 |
Protein GI | 189347913 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGCGCC TCAATGCCGG AATTCCGGAA GGACCGATAG CTGACAAATG GACTGCATAC AGGTCGGCGG CAAAACTGGT CAATCCCAAC AACAAGAGAA AACTCGACAT CATCGTTGTC GGCACCGGTC TTGCCGGGGC ATCCGCTGCG GCAACGCTTG GCCAGCTCGG CTACAACGTC AAGGTGTTCT GTTATCAGGA TACGCCTCGC CGGGCGCACA GCATTGCCGC CCAGGGCGGA ATCAATGCGG CTAAAAACTA TCCCAACGAC GGAGACAGCG TCTATCGGCT TTTTTACGAT ACCATCAAGG GTGGGGACTA CCGTTCCCGT GAAGCCAATG TCTATCGTCT GGCCGAAGTC AGCAACCAGA TTATCGATCT TTGTGTGGCT CAGGGTGTTC CGTTCGCCAG GGAGTACGGC GGTCTTCTGA CCAACCGTTC ATTTGGAGGA GCCCAGGTGT CAAGGACCTT TTATGCCCGG GGGCAGACCG GGCAGCAGCT TCTGCTCGGA GCGTACAGCG CGTTGAGCCG TCAGATCGAC GCAGGCAACG TTACGCTCTA CAACCGGAGG GATGTGCTCG ATATGGTGCT TGTTGACGGA AAGGCTCGGG GCATTATTGC CCGCAATCTC GTTACCGGAG CAATCGAGCG TTTCGCGGCG CATGCCGTCG TTCTTGCAAC CGGCGGATAT GGCAATGTGT TTTATCTTTC CACCAACGCT ATGGGGTCGA ATGTGTCTCC GGCATGGAGC GCCTATAAAA AAGGCGCCCT GTTCGGCAAC CCCTCATTTA CCCAGATACA TCCGACCTGT ATTCCTGTAC ACGGAGAGTT TCAGTCGAAG CTTACCCTGA TGAGTGAGAG TCTTCGCAAT GACGGCAGAA TCTGGGTTCC TGCATATAAA AAGGATGTCG ACCGGCTGCG TTCAAAGGAA ATAAAACCTT CGGAGATTCC TGATTCCGAC CGGGACTACT ATCTGGAGCG GCGCTATCCT GCTTTCGGCA ACCTGGTGCC GAGGGATGTC GCTTCGAGAG CGGCAAAAGA GCGCTGTGAT GCCGGATACG GCGTCAGTTC CACCGGTTTC GCCGTCTTTC TGGACTTTGC CGATGCCATC AAACGAAAGG GACAGGGCAC TATCGATGCA CTTTACGGGA ATCTCTTTCA AATGTATGAG CAGATTGTGG CCGACAGTCC TTATGAAACT CCTATGATGA TCTATCCGGC GGTTCACTAT ACCATGGGGG GCTTGTGGGT CGATTATGAA CTGATGACAA CGGTTCCCGG CCTCTATGCT ATCGGCGAAT GCAATTTTTC CGATCATGGG GCAAATCGCC TCGGAGCGTC AGCGCTTATG CAGGGACTTG CCGATGGCTA TTTCATTCTG CCTGCTACGA TTTCAAACTA TCTTGCTGCG GAAATTCATA CCCCTCGATT CGATCCCGAC GGTTCGGAGT TCACGCTTGC AGCAGAGAAG GTCAGAGAGC GGCTTGTACG TCTGAAGAAT ACCGGAGGAA AACAGTCTGT CGATCATTAT CATCGTCAGC TTGGCAGGCT TATGTGGGAG AACTGCGGTA TGGCAAGAAG CCAGCCAGGC CTTGAAGAGG CGCTTGAGCG GCTTCCGCTG CTGCGCGAGG AGTTTCATGC GAACGTATGC ATTCCGGGAT CTCTTGACGA GTACAATCCT GAACTTGAAA AGGCATGGCG CGTTGCCGAT TTTCTTGAAC TTGGCGAGTT GATGGTTCGT GACGCCCTGC AGCGCAGGGA GTCATGCGGA GGTCATTTCC GTGAAGAGTA CCAGACACCG GACGGCGAGG CTTTGCGTAA TGATGAGGAC TTTACCTTTG TTGGAGCATG GGAGTATAAG GGGAAGAGTT GTGCGGCCGA ACTGCATCGT GAAGATCTCA ATTTTGAGGT TGTCAAACCT TCACAACGCT CGTATAAATA A
|
Protein sequence | MMRLNAGIPE GPIADKWTAY RSAAKLVNPN NKRKLDIIVV GTGLAGASAA ATLGQLGYNV KVFCYQDTPR RAHSIAAQGG INAAKNYPND GDSVYRLFYD TIKGGDYRSR EANVYRLAEV SNQIIDLCVA QGVPFAREYG GLLTNRSFGG AQVSRTFYAR GQTGQQLLLG AYSALSRQID AGNVTLYNRR DVLDMVLVDG KARGIIARNL VTGAIERFAA HAVVLATGGY GNVFYLSTNA MGSNVSPAWS AYKKGALFGN PSFTQIHPTC IPVHGEFQSK LTLMSESLRN DGRIWVPAYK KDVDRLRSKE IKPSEIPDSD RDYYLERRYP AFGNLVPRDV ASRAAKERCD AGYGVSSTGF AVFLDFADAI KRKGQGTIDA LYGNLFQMYE QIVADSPYET PMMIYPAVHY TMGGLWVDYE LMTTVPGLYA IGECNFSDHG ANRLGASALM QGLADGYFIL PATISNYLAA EIHTPRFDPD GSEFTLAAEK VRERLVRLKN TGGKQSVDHY HRQLGRLMWE NCGMARSQPG LEEALERLPL LREEFHANVC IPGSLDEYNP ELEKAWRVAD FLELGELMVR DALQRRESCG GHFREEYQTP DGEALRNDED FTFVGAWEYK GKSCAAELHR EDLNFEVVKP SQRSYK
|
| |