Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_2378 |
Symbol | |
ID | 6355849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 2603839 |
End bp | 2607138 |
Gene Length | 3300 bp |
Protein Length | 1099 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642669970 |
Product | trehalose synthase |
Protein accession | YP_001944380 |
Protein GI | 189347851 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases [COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis |
TIGRFAM ID | [TIGR02456] trehalose synthase [TIGR02457] trehalose synthase-fused probable maltokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCAAC CCGAACCGCT CTGGTACAAA GACGCCATCA TTTACGAAGC ACATGTCAAA ACGTTTTACG ACAGTAACAA CGACGGCATC GGTGATTTTC AGGGACTTCG TCAAAAACTC GGTTATCTGG AAAGTCTCGG TATTACCGCG ATCTGGCTGC TGCCGTTCTA TCCGTCGCCG CTTCGTGACG ACGGGTACGA TATCGCCGAC TATATGTCCG TAAATCCCGA CTACGGGACG CTCGAAGATT TCAGACAGTT CCTCGAGGAA GCGCATTCAC GCGGGATGAA AGTCATTACC GAACTGGTTG TGAACCATAC CTCCGATCAG CACGCGTGGT TTCAGCGGGC TCGCAAAGCC CCGGCAGGCT CTCCTGAACG GAATTTCTAT GTCTGGAGCG ACGATATGGA CAAATATTCC GAGACCCGCA TTATTTTTCA GGATTTCGAA GCATCCAACT GGACCTGGGA TCCGGTCGCC AAGCAGTATT TCTGGCATCG TTTCTATCAC CACCAGCCCG ATCTGAACTT TGAAAATCCG GAAGTCCATC AGGCCCTTTT CGATGTACTC GATTTCTGGC TTGGTATGGG CGTTGACGGT CTGAGGCTCG ATGCCGTCCC CTACCTCTAC GAGGCAGAGG GCACCAATTG CGAAAATCTT CCCCAGACCT ACGATTATCT CAGGAAACTT CGCAGTTATG TCGACGAACA TTATCCGAAC CGGATGCTGC TTGCCGAAGC GAACCAGTGG CCTGAAGATT CCGCCGCTTA TTTAGGCGAG GGCGATCTGT GCCATATGAA CTTCCATTTT CCCCTGATGC CGCGCATGTA TATGGCGCTG GCGACCGAAG ATCGTTTTCC CATTCTCGAC ATTCTCGACC AGACTCCCGA AATTCCTGAA AACTGCCAGT GGGCCTCTTT TCTGCGCAAC CACGACGAGC TGACCCTTGA AATGGTGACC GATGAGGAGC GCGACTACAT GCGCCGGGTC TATGCCAACG ATCCCAGAGC GCGCATCAAC CTCGGTATCC GCAGAAGGCT TGCTCCGCTC ATGACCAACG ACCGGCGGCG TATCGAACTG ATGAACATCA TGCTGCTCTC GCTACCCGGC ACACCGGTGC TCTACTACGG CGACGAGATC GGTATGGGCG ACAACTATTA TCTTGGCGAC CGGGACGGTG TTCGCACTCC TATGCAGTGG AACTCCGATC GTAATGCCGG TTTTTCTCGC GCCAACCCGC AAAAACTGCT GCTTCCGGTC ATTATCGATC CCGAATACCA TTACGAAGCC GTCAACGTAG AGGTGCAGGA GAGCAACACC AATTCGCTGC TCTGGTGGAT GCGGCACGCT ATCGCCACGG CAAGGCGCTA CAAGTCGCTC AGTCGCGGCA GCATCGAGTT TCTGCAGGTG AACAACCCCA AAGTGCTGAT ATTTACCCGC ACCTTCGAGG ATGAAACCAT GCTCGCAGTG ATCAACCTTT CCCGAAATGC CCAGGCGGTC ACGATCGATC TGTCCGGCTA CGAAGGGTGT ATCCCCGAAG AGGTCTTCAG TCTGAACCGG TTCCCGAAAG TTCGCGAAAC GCCCTATATG GTCGCTCTCG GAGCATACGG TTTCTTCTGG CTTCGGCTTG TCAGAGAGAA CGCCCAGGAA GGCGGGCGTC CCTATCTTGA CTCGCCGTAT GCGAAAGTTG CCCGCTGGCA GAGCTGTTTT GTAGGTAAAA GCCGGGAACG GCTCGAAACC GAAATCCTTC CGAAGTACTT TATGGGCAGC CGCTGGTTCG GCGGCAAGGC AAGAACCATC ATACGCATCG CCATTATCGA TACAATCCCG GTTGAGGGGT TGGAGCATGC CAAACTGCTG ATTACCGAGG TAAGCTATTC AAGCGGCGAA AACGAGCGTT ATCAGCTTCC GGTCTGCTTT ACTCCTGAAG GTGTCGTCAG CACTGCCGCC GATAACTTCT CCAGCCGGGT TATTGCGAAA GTCGTACTTG GCGATGAGGA AGGGTATCTC TGCGATGCCA CCTATGAAAA CAGCTTTCTC AGTCGGCTTT TCCACCTTGT TATGGGCAAC TCGGAATGGA AGGGCAAGCT CGGCAATGTC AACGGCGTAA AAGGAGAGGC GTTCGACGGA ATTTCCAGGG ATAAGGGGAC CGGGCCCGAA CCATTTCTGC TCGGCAACGA GCAGAGTAAC ACCTCCATCC GATATCGTGA CGATCTCTGC CTGAAACTTT ATCGCAGAAT TGAAACAGGA GTCTCTCCCG AAGTCGAAAT GTGCCGCGCG TTGTCGGAGA GAAGCTCGTT CGCTCAACTG CCCAATTATC TTGGGACGCT TGATTACGTT CAGAGCCGTA CGAACAGGTA TTCCATCGGT ATTCTGCAGA GTTTCGTGCC CAATGAAGGC GATACCTGGA AGTTGTCGCT CGATTATGTA CAGCGGTATT ATGAAGAGGT GCTTTCGAAA CTGCAGTGCG GTATCGAACT GCCTCCGCTT CCGGCTCTTA GCGGCAATCC CGTTCCTATT CCTCCGGCTA TGCAGGAGCT TATCGGCGGA ACCTGGCTCG GCCTGGTTGA AAAGCTTGCC GAACGAACGG CCGAGATGCA TATCGCTCTG GCCTCGATGA CCGACCAGCC CGAGTTTGCA CCGGAGCCCT TTACGTCGCT CTACCAGCGT TCCATCTATC AGGCGATGTG CGAGCAGGTA AAGCGCAGTA TGATTCTGCT TCGTGAAGTG AAAGATTTCA TGATCGGCGA ACCGAAGGAA CTGGTATTGC AGATGCTGGC CAATCAGAAA AAAATTCTGC AGCAGTTCGA ACCGATCAGA ACCGGGAAAA TAGATACCCT GAAGGTGAGA ATTCATGGCG ATTACCATCT TGGGCAGGTA CTCTCTACAG GCAATGACGT CGTGATTATC GACTTTGAGG GCGAGCCCTC CCGTCCGATA TCGGAACGCA AGATCAAACG CTCGGTTTTT CGCGATGTGG CCGGCATGAT GCGTTCGTTC GATTATGCGG CCTTCAATGT GCTTCTGCAG GCAAATCCGG TGATCAGGCA GGAGGATGTA GCGCGCCTTG AACCATGGGC CGAGCGCTGG AGCTACTATG TGGGTCAGCA CTTTGTGGAT TCGTATTTCA GTGCGGCAAA GGGGCATGAA ATCGTTCCCG AAGAGGCCTC TCAGCGAGAG CACCTGCTTC GCGGCTACCT CATGAACAAG GCGGTTTACG AGTTGAATTA CGAGCTGAAC AACCGTCCTG AGTGGGCCAC GATTCCCATG CGGGGCATTC TTAAGCTCAT CGAGTTGTAA
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Protein sequence | MYQPEPLWYK DAIIYEAHVK TFYDSNNDGI GDFQGLRQKL GYLESLGITA IWLLPFYPSP LRDDGYDIAD YMSVNPDYGT LEDFRQFLEE AHSRGMKVIT ELVVNHTSDQ HAWFQRARKA PAGSPERNFY VWSDDMDKYS ETRIIFQDFE ASNWTWDPVA KQYFWHRFYH HQPDLNFENP EVHQALFDVL DFWLGMGVDG LRLDAVPYLY EAEGTNCENL PQTYDYLRKL RSYVDEHYPN RMLLAEANQW PEDSAAYLGE GDLCHMNFHF PLMPRMYMAL ATEDRFPILD ILDQTPEIPE NCQWASFLRN HDELTLEMVT DEERDYMRRV YANDPRARIN LGIRRRLAPL MTNDRRRIEL MNIMLLSLPG TPVLYYGDEI GMGDNYYLGD RDGVRTPMQW NSDRNAGFSR ANPQKLLLPV IIDPEYHYEA VNVEVQESNT NSLLWWMRHA IATARRYKSL SRGSIEFLQV NNPKVLIFTR TFEDETMLAV INLSRNAQAV TIDLSGYEGC IPEEVFSLNR FPKVRETPYM VALGAYGFFW LRLVRENAQE GGRPYLDSPY AKVARWQSCF VGKSRERLET EILPKYFMGS RWFGGKARTI IRIAIIDTIP VEGLEHAKLL ITEVSYSSGE NERYQLPVCF TPEGVVSTAA DNFSSRVIAK VVLGDEEGYL CDATYENSFL SRLFHLVMGN SEWKGKLGNV NGVKGEAFDG ISRDKGTGPE PFLLGNEQSN TSIRYRDDLC LKLYRRIETG VSPEVEMCRA LSERSSFAQL PNYLGTLDYV QSRTNRYSIG ILQSFVPNEG DTWKLSLDYV QRYYEEVLSK LQCGIELPPL PALSGNPVPI PPAMQELIGG TWLGLVEKLA ERTAEMHIAL ASMTDQPEFA PEPFTSLYQR SIYQAMCEQV KRSMILLREV KDFMIGEPKE LVLQMLANQK KILQQFEPIR TGKIDTLKVR IHGDYHLGQV LSTGNDVVII DFEGEPSRPI SERKIKRSVF RDVAGMMRSF DYAAFNVLLQ ANPVIRQEDV ARLEPWAERW SYYVGQHFVD SYFSAAKGHE IVPEEASQRE HLLRGYLMNK AVYELNYELN NRPEWATIPM RGILKLIEL
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