Gene Clim_2328 details

Gene Information

• Locus tag: Clim_2328
• ID: 6355674
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: -
• Start bp: 2556081
• End bp: 2557970
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 642669920
• Product: DNA mismatch repair protein MutL
• Protein accession: YP_001944330
• Protein GI: 189347801
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0323] DNA mismatch repair enzyme (predicted ATPase)
• TIGRFAM ID: [TIGR00585] DNA mismatch repair protein MutL

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAAA TCTCAAGATT ACCGGATACG GTTGCCAATA AAATATCGGC TGGTGAGGTG 
GTTCAGCGGC CTGCATCGGT GGTCAAGGAG CTGCTTGAAA ATGCCATCGA CGCAGGAGCA 
TCCAGAATAA CGGTCATGAT AAAGGATGCC GGCAAGGAGC TGATCAGGAT TATCGATAAC 
GGCACGGGCA TGAATCGTGA GGACGCCCTG CTTTGTGTAG AGCGGTTTGC CACGAGCAAG 
ATTTCAGTTG TTGACGATCT CGATACCCTG ATGAGCCTGG GGTTCAGGGG GGAGGCGCTT 
GCAAGTATCT CTTCGGTATC GCATTTCGAG CTGAAAACCC GGCAGGCCTT TTCGCCGCTT 
GCCCTGAAGT TTCGTTACGA GGGAGGAGCG CTTGCGGAGG AGAGCGAGGT GTCCGGGGAG 
GAGGGTACTT CGATCAGCGT CAGGAACCTG TTCTACAATG TACCTGCCCG TCGCAAATTC 
CTGAAATCCA ATGCTACGGA GTTCCGTCAT ATTTTTGAAT CTGTCAGATC GCTCTCGCTT 
GCCTATGCCG ATATTGAGTG GCGGATGTAT AATGATGACG AGGAGCTGTT CCACTTCAGG 
AATCCGGATA TTCGCGAGCG GCTGAACTAC TATTACGGGA GCGATTTTTC CGAAGGGCTC 
ATTTCCATTA CCGAGGAAAA CGATTATCTC TCGATTCACG GGTTTATCGG GAAGCCGGGG 
ATGCTGAAGC GGCACAAGGC GGACCAGCTG TTCTATATCA ACCGGAGAAT TATTCAGAAC 
CGGATGCTTT CGCAGGCTCT GCAACAGGCA TACGGCGAAC TGCTTGAAGA TCGTCAGGCT 
CCTTTTGCAA TGCTTTTTCT CGGTATCGAT CCCTCTCGTG TCGACGTCAA CGTGCATCCG 
GCGAAGCTCG AAGTCAAGTT CGAAGACGAG CGCAGTGTCC GCAACATGTT TTATCCTGTC 
GTCAAACGGG CGGTGCAGCT TCACGATTTT TCTCCCGATG CATCGTTTGT TCCCGATCAG 
GGAGTGCAGG GAGAGAGTAT TCAGCCGGAA GATGAGGCGC TCAATCGCCG CCTCATGTAC 
CATGAGCGCC CAGGGCGTAT GGCCACGACT GCGGAGCTCT ATACCGATTA CCGTCAGCAT 
TCGCTGCCGC AGTCATCCGG AAAAGAGCAC GGCCCGCAGT CCCGGCAGGG GGAGTTTTTT 
TCTGCGCATG AGCCTCTGGA ACGCTGGAAA AAAGAGGGCG TGGAGCCTGA GGGCGACGAA 
GTGTTCACGA CAATGCTTCA ATCCCGCTTT CATGACGACG AAAGCGCAGC CGGGGGGGGG 
ACGGAACCGA AAATCTGGCA GCTTCATAAC AAGTATATCA TTTGCCAGAT CAAGAACGGC 
ATGATGATTA TCGATCAGCA TGTGGCGCAT GAACGGGTAC TCTACGAACG GGCGCTGGAC 
GTCATGAACC AGAATGTGCC GAATTCCCAG CAACTGCTTT TTCCGCAGAA GATCGAGATG 
CGACAGTGGG AGTATGAGGT GTTCGAGGAG ATTCGTGACG ATCTCTATCG CCTTGGCTTC 
AATCTTCGGG ATTTCGGATC GAAAACCGTT ATGATAGAAG GGATTCCGCA GGATGTCAGA 
TCCGGAACGG AGGTAACCAT ACTGCAGGAT ATGATTGCCG GTTATCAGGA AAACGCATCG 
AAGCTCAAGC TGGAAAAACG GGACAACCTG GCAAAGTCCT ATTCGTGCCG GAACGCAATC 
ATGGCCGGTC AGAAACTCAG TCTCGAAGAG ATGCGTTCAC TCATCGACAA CCTTTTTGCC 
ACCCGGGTTC CCTATTCATG TCCTCATGGC AGGCCGGTCA TCATCAAGCT GATGCTCGAT 
CAGCTCGACC GGATGTTCGG TCGGACGTAA 

 

Protein sequence

MAKISRLPDT VANKISAGEV VQRPASVVKE LLENAIDAGA SRITVMIKDA GKELIRIIDN 
GTGMNREDAL LCVERFATSK ISVVDDLDTL MSLGFRGEAL ASISSVSHFE LKTRQAFSPL 
ALKFRYEGGA LAEESEVSGE EGTSISVRNL FYNVPARRKF LKSNATEFRH IFESVRSLSL 
AYADIEWRMY NDDEELFHFR NPDIRERLNY YYGSDFSEGL ISITEENDYL SIHGFIGKPG 
MLKRHKADQL FYINRRIIQN RMLSQALQQA YGELLEDRQA PFAMLFLGID PSRVDVNVHP 
AKLEVKFEDE RSVRNMFYPV VKRAVQLHDF SPDASFVPDQ GVQGESIQPE DEALNRRLMY 
HERPGRMATT AELYTDYRQH SLPQSSGKEH GPQSRQGEFF SAHEPLERWK KEGVEPEGDE 
VFTTMLQSRF HDDESAAGGG TEPKIWQLHN KYIICQIKNG MMIIDQHVAH ERVLYERALD 
VMNQNVPNSQ QLLFPQKIEM RQWEYEVFEE IRDDLYRLGF NLRDFGSKTV MIEGIPQDVR 
SGTEVTILQD MIAGYQENAS KLKLEKRDNL AKSYSCRNAI MAGQKLSLEE MRSLIDNLFA 
TRVPYSCPHG RPVIIKLMLD QLDRMFGRT