| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_2287 |
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| Symbol | gatB |
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| ID | 6355632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 2520255 |
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| End bp | 2521682 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642669878 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_001944289 |
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| Protein GI | 189347760 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.888544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATATG AATTAGTTGT GGGCCTCGAG GTCCACTGTC AGCTCAATAC CAACAGCAAG
GCGTTCTGCG GCTGTTCAAC CCGATTCGGC AATCCCGCCA ACACCAATGT GTGCCCGGTC
TGTCTGGCTC TTCCGGGAGC CCTGCCGGTG CTGAACCGTC GCGTTGTCGA GGATGCCGTC
AAGCTCGGCC TGGCAACCGG CTGCTCGATC GCCCCGAGCT CCATTCTTGC CAGAAAGAAC
TATTTCTACC CCGATCTTCC GAAAGGGTAT CAGATATCCC AGTTCGAAGA ACCGATCTGC
ACCGAAGGCA TGCTGCGTAT CGATGTCGGG GACGGGTGCC GCGACATCAG ACTGATCAGG
ATCCATATCG AGGAAGACGC CGGCAAGTCG ATTCACGATA TCGGCGACGA CACCTATATC
GACGTGAACC GTTGCGGCGT GCCGCTTCTT GAAATTGTCA GTTACCCCGA CATCCGCACA
TCGAGGGAGG CGTCGGCTTA TCTGCAGAAA ATGCGCCAGA TCGTGAAGTA TCTCGGTATT
TCCGACGGCA ACATGGAAGA GGGCAGTCTG CGCTGCGACG CAAACGTATC GGTCAGACTT
TTCGGCGCAG AGGAGTACGG TACCCGCACC GAAATCAAGA ACATGAACTC CTTCAAGAAT
GTCGAGAAAG CGATCGAGTA CGAGATGCAG CGCCATATCG ACATCATCGA TGGCGGCGGA
ACGATCGTGC AGGAAACCAG GCTCTGGGAT GCCGACAAGG GTGAGACCCG TTCGATGCGC
GGCAAGGAGT TCGCACACGA CTACCGTTAC TTCCCCGATC CCGATCTGGT GCCGGTGCTG
GTTGACCAGG AGATGCTCGA ACGAATAAGG CTCGAACTTC CCGAGTTTCC CGAAGACCGC
GAGCGGCGGT TTGTCAGTGA GTACGGAATT CCGCCATACG ACGCCGGAGT TCTTACGGTC
GAACGCGAGA TCGCCGATTA TTTCGAACGG ACCCTGACGG TTTGCGGCGA CGCAAAGGCG
GCTTCAAACT GGGTAATGGG TGAGGTGATG CGTACGCTGA AGGAGAAATA CCTTGATATT
AAGGAGTTCG CGATCTCGCC GGAGCGGCTT GGAGGATTGA TCGGGCTTAT CGGCAAAGGA
GCCATCAGCA ACACCATCGC CAAACAGGTT TTCGAACTGA TGCAGACGGG CGAAGCTTCT
GCCGAAGAAA TCGTCGATCG GGAAGGGCTT GCCCAGGTTT CGGATACCGG GGCAATCGAG
CGGACGGTTG ACGAGATACT GGAGGCCAAC CCCAAACAGC TTGCCGACTA TCGGGAGGGA
AAGACCAAGT TGTTCGGTTT CTTTGTGGGA CAGTGCATGG CCCGCATGAA AGGAAAGGCC
AATCCGCAGG TCGTCAACGA TGTGCTGAAA AGCCGTCTCG ACGGGTGA
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| Protein sequence | MKYELVVGLE VHCQLNTNSK AFCGCSTRFG NPANTNVCPV CLALPGALPV LNRRVVEDAV
KLGLATGCSI APSSILARKN YFYPDLPKGY QISQFEEPIC TEGMLRIDVG DGCRDIRLIR
IHIEEDAGKS IHDIGDDTYI DVNRCGVPLL EIVSYPDIRT SREASAYLQK MRQIVKYLGI
SDGNMEEGSL RCDANVSVRL FGAEEYGTRT EIKNMNSFKN VEKAIEYEMQ RHIDIIDGGG
TIVQETRLWD ADKGETRSMR GKEFAHDYRY FPDPDLVPVL VDQEMLERIR LELPEFPEDR
ERRFVSEYGI PPYDAGVLTV EREIADYFER TLTVCGDAKA ASNWVMGEVM RTLKEKYLDI
KEFAISPERL GGLIGLIGKG AISNTIAKQV FELMQTGEAS AEEIVDREGL AQVSDTGAIE
RTVDEILEAN PKQLADYREG KTKLFGFFVG QCMARMKGKA NPQVVNDVLK SRLDG
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