Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_2228 |
Symbol | rplD |
ID | 6355251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 2455822 |
End bp | 2456448 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642669820 |
Product | 50S ribosomal protein L4 |
Protein accession | YP_001944231 |
Protein GI | 189347702 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000000169782 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACTTA AAGTCTTAAA TACAGGCGGC ACTGAAACAG GAGAGGTTGT TACGCTCAAT GATGAGATCT TCGGCGCTGA TATATCTGAA CATGCAATGT ATCTTGATGT AAAATCAATA CTTGCAAACA GAAGGCAGGG AACGCACAAA GCAAAGACCC GTGCTGAAGT ACGCGGCGGC GGAAGAAAGC CTTTTCGTCA GAAAGGTACT GGTAACGCAC GTCAGGGTTC TACCCGTTCT CCTCTGATGA TTGGCGGTGG CACTATATTC GGACCACAGC CGCGAAGCTA CGACCAGAAG GTCAACAAAA AAGTTAAACA GCTTGCCCGT CGCTCAGCGC TCAGCGCAAA AGCGCAGGCC GGTCAGATTG TCGTTGTCGA GGATTTCAGG CTTGGCGAAA TCAAGACAAA ACCGGTGGCC GATATTCTGA AGAATCTGGG ACTCGCAGAG AAAAAAACCC TCATGCTGAC GCCTGAGTAC GATATGATTA TCGCTCGATC AGGCCGTAAT ATTGAGGCGC TTAATATTAT GTCGGCAGAA AAGGCTTCGA CATATGATAT ACTCGACAGC CAGGCGATCG TTTTCCAGAA AGCCGCTTTG AAAAAAATAG AAGATACCTT AGGGTAA
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Protein sequence | MELKVLNTGG TETGEVVTLN DEIFGADISE HAMYLDVKSI LANRRQGTHK AKTRAEVRGG GRKPFRQKGT GNARQGSTRS PLMIGGGTIF GPQPRSYDQK VNKKVKQLAR RSALSAKAQA GQIVVVEDFR LGEIKTKPVA DILKNLGLAE KKTLMLTPEY DMIIARSGRN IEALNIMSAE KASTYDILDS QAIVFQKAAL KKIEDTLG
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