Gene Clim_2228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_2228 
SymbolrplD 
ID6355251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand- 
Start bp2455822 
End bp2456448 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content48% 
IMG OID642669820 
Product50S ribosomal protein L4 
Protein accessionYP_001944231 
Protein GI189347702 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0000000169782 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTTA AAGTCTTAAA TACAGGCGGC ACTGAAACAG GAGAGGTTGT TACGCTCAAT 
GATGAGATCT TCGGCGCTGA TATATCTGAA CATGCAATGT ATCTTGATGT AAAATCAATA 
CTTGCAAACA GAAGGCAGGG AACGCACAAA GCAAAGACCC GTGCTGAAGT ACGCGGCGGC 
GGAAGAAAGC CTTTTCGTCA GAAAGGTACT GGTAACGCAC GTCAGGGTTC TACCCGTTCT 
CCTCTGATGA TTGGCGGTGG CACTATATTC GGACCACAGC CGCGAAGCTA CGACCAGAAG 
GTCAACAAAA AAGTTAAACA GCTTGCCCGT CGCTCAGCGC TCAGCGCAAA AGCGCAGGCC 
GGTCAGATTG TCGTTGTCGA GGATTTCAGG CTTGGCGAAA TCAAGACAAA ACCGGTGGCC 
GATATTCTGA AGAATCTGGG ACTCGCAGAG AAAAAAACCC TCATGCTGAC GCCTGAGTAC 
GATATGATTA TCGCTCGATC AGGCCGTAAT ATTGAGGCGC TTAATATTAT GTCGGCAGAA 
AAGGCTTCGA CATATGATAT ACTCGACAGC CAGGCGATCG TTTTCCAGAA AGCCGCTTTG 
AAAAAAATAG AAGATACCTT AGGGTAA
 
Protein sequence
MELKVLNTGG TETGEVVTLN DEIFGADISE HAMYLDVKSI LANRRQGTHK AKTRAEVRGG 
GRKPFRQKGT GNARQGSTRS PLMIGGGTIF GPQPRSYDQK VNKKVKQLAR RSALSAKAQA 
GQIVVVEDFR LGEIKTKPVA DILKNLGLAE KKTLMLTPEY DMIIARSGRN IEALNIMSAE 
KASTYDILDS QAIVFQKAAL KKIEDTLG