Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_2175 |
Symbol | |
ID | 6355969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 2412896 |
End bp | 2414092 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642669766 |
Product | aminotransferase class V |
Protein accession | YP_001944178 |
Protein GI | 189347649 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | [TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.670004 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGTTT ATTTTGATAA TAATGCAACC ACTCCTCTGC ATCCCGAAGT TAAAAAGGAG TTGATCGAAG CGATGGGGAT GTTCGGTAAC CCTTCGAGTA TGCATGCCTG GGGCCGCGAG GCTCGGGCCA ATGTCGAGGA TGCCCGGAGT CGGGTGGCCG GTTTTATTGG AGCGCATGAC GATGAGATTG TTTTTGTCGG CAGTGGTTCC GAAGCCAATA ATACCGTGCT CTCTCTTTTT GTCTGCGCCT CAAACCAGTG TATTCCCGGT ACCAGGATGC GCAGTTCCAT TATTACGACG AAAATTGAAC ACCCCTGTGT GCTTGAAACC TCGGAATGTC TCGCTCACCG GGGGGCAAGG GTAAAGTATC TCAATGTTGA CCGTTACGGA AAAGTCGATC TCGATCAGCT TGCCGGTATG CTTGGAGATG ATGTCGGTCT TGTTTCGGTT ATGATGGCGA ATAATGAGAT CGGTACGCTG CAGGATATTG AAACCATATC GAAAATGGTG CATGAGTGCG GTGCGCTGAT GCACACGGAT GCTGTTCAGG CGGTCGGAAA GATTCCGGTT GACGTCGCCA TGCTCGGGGT GGATTTTCTT ACGCTTTCGG CTCATAAAAT ATATGGACCG AAAGGGGTTG GAGCTCTCTA TGTGAAAAAA GGCATTCCTT ACTGTCCGTT CATCCGCGGA GGTCATCAGG AGAGAGGTCG TCGGGCGGGA ACTGAAAATA CGCTTGGCAT TCTTGGTCTC GGAAAGGCCG TCGAAATGCG ACAGCTCGAA ATGGAGTCTG AAGAAAAGCG ACTGGCCGGG ATGAAAGCGG TTCTTAAAAA AGGCATTGAA GAGCGGATCG ACGATATTTA TTTCAACGGG CACCCGACCG ACTCCCTTTC GGGAACCCTG AACGTTTCGT TTCCCGGAGC TGAGGGAGAG GCGATTCTGC TCTATCTCGA TCTTGAAGGC ATTGCGGTTT CAACCGGGTC GGCCTGCGCC TCAGGATCTC TCGACCCGTC TCATGTACTG CTGGCAACGG GAGTCGATGC AGAGCGAGCG CACGGATCCA TCCGTATCAG CCTCGGGCGG GAAAGCACCA TGCAGGAGGT CGAGTACATG CTCGATATAC TGCCTAAAAC AATTAAACGG ATAAGAGACA TGTCAACGGC ATACATTAAA GGAGGAACAC ATGCTGCAAG CAGGTGA
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Protein sequence | MKVYFDNNAT TPLHPEVKKE LIEAMGMFGN PSSMHAWGRE ARANVEDARS RVAGFIGAHD DEIVFVGSGS EANNTVLSLF VCASNQCIPG TRMRSSIITT KIEHPCVLET SECLAHRGAR VKYLNVDRYG KVDLDQLAGM LGDDVGLVSV MMANNEIGTL QDIETISKMV HECGALMHTD AVQAVGKIPV DVAMLGVDFL TLSAHKIYGP KGVGALYVKK GIPYCPFIRG GHQERGRRAG TENTLGILGL GKAVEMRQLE MESEEKRLAG MKAVLKKGIE ERIDDIYFNG HPTDSLSGTL NVSFPGAEGE AILLYLDLEG IAVSTGSACA SGSLDPSHVL LATGVDAERA HGSIRISLGR ESTMQEVEYM LDILPKTIKR IRDMSTAYIK GGTHAASR
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