| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1997 |
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| Symbol | |
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| ID | 6355501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 2217946 |
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| End bp | 2218704 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642669595 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001944008 |
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| Protein GI | 189347479 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGC GAACAGCAGA GAACAGAGAG GAACGTCTGG TAAGAATCAA CAGGTATCTG
GCAATGTGCG GCGTAGCATC CAGACGGGCT TCCGATCAGC TTGTCGAGGC CGGTCGGGTA
ATGATTAACG GCAGCATCAT TCTGGAGCCC GGTCTGAAAG TGGATCCTTC GGTTGATGAA
GTTATCGTTG ACGGCAGTAT GCTGGCTCTC CCGGAAGGGA AAAAGGTCTA TATCCTTTTC
AATAAGCCTA AAAATGTCAT TACCACGAAC AGCGACGAAA AAAACCGGGA AACGGTACTG
AACTACATCA GTGTCAAAGA GCGGATTTAT CCGGTCGGGC GGCTTGACAG GAAAACAACC
GGGGTGTTAT TACTCACAAA CGATGGAAAT CTTGCACATA AATTAATGCA TCCTTCTTCA
AATGTGAAAA AGGAGTATAT TGCGGTATTG GATAAAAAAT TTCCGCATAC GCTTTTGCTT
CAGCTGACGG GAGGTATGCG CCTGAAGGAT ACCGGTGAAA AGGTGAGCCC TTGCCAGGCA
AAAATACTGG ATGAAGGTTT TCAGGTTTGG CTGAGTATTC ACGAAGGAAA AAACCACCAG
GTCAGAAGAA TGTTCGAAAC TCTCGGTTTC GAAGTCGATA AGCTTGAGCG CGTGGCCTAT
GCAGGCCTGA AAGTCGGTGA TCTCCGGAGA GGTGAGTGGA GGGCCCTCGA CCGTAAAGAG
ATTCAGCAGC TTTTTCAGCA GGCAGGAGGC GACGTCTGA
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| Protein sequence | MKKRTAENRE ERLVRINRYL AMCGVASRRA SDQLVEAGRV MINGSIILEP GLKVDPSVDE
VIVDGSMLAL PEGKKVYILF NKPKNVITTN SDEKNRETVL NYISVKERIY PVGRLDRKTT
GVLLLTNDGN LAHKLMHPSS NVKKEYIAVL DKKFPHTLLL QLTGGMRLKD TGEKVSPCQA
KILDEGFQVW LSIHEGKNHQ VRRMFETLGF EVDKLERVAY AGLKVGDLRR GEWRALDRKE
IQQLFQQAGG DV
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