Gene Clim_1953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1953 
Symbol 
ID6355008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand+ 
Start bp2170193 
End bp2170708 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content53% 
IMG OID642669551 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_001943964 
Protein GI189347435 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000141087 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCAGG AAAATACCCC GCTGGTCGGC ATCATCATGG GATCGGATTC GGATTTCGAA 
ATCATGAAAG AGGCTGTTTA CGTGCTCGAT GAATTCGGCA TCGCTTCTGA AATTTCGGTT 
ATCTCGGCAC ACCGTACGCC GCAGGACCTT GAAAAGTATG CCGTAACGGC AAGAACCCGT 
GGTCTGAAAA TCATTATCGC AGGTGCGGGC GGAGCGGCTC ATCTGCCGGG CGTCACGGCC 
GCCATGACCG TTCTGCCGGT AATCGGCGTA CCGATTTTCA GTAAAAAACT CAACGGACAG 
GATTCGCTCT ATTCGATTGT GCAGATGCCT GCAGGCATTC CTGTGGCTAC GGTAGGTATC 
GACAATGCCC GGAACGCAGC GCTGCTTGCC CTGCAGATAC TCGCTCTTTC AGACAGCGCG 
ATCATGACGG CAATGGAAGA GTTCCGGATA AAACTTGCCG ATGCGTCCCG CCAGAAAACC 
GGAAAAATCC GGGATATGCT GCATGCTAAA AGCTGA
 
Protein sequence
MAQENTPLVG IIMGSDSDFE IMKEAVYVLD EFGIASEISV ISAHRTPQDL EKYAVTARTR 
GLKIIIAGAG GAAHLPGVTA AMTVLPVIGV PIFSKKLNGQ DSLYSIVQMP AGIPVATVGI 
DNARNAALLA LQILALSDSA IMTAMEEFRI KLADASRQKT GKIRDMLHAK S