Gene Clim_1948 details

Gene Information

• Locus tag: Clim_1948
• ID: 6355003
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: +
• Start bp: 2160659
• End bp: 2162611
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 642669546
• Product: ABC transporter related
• Protein accession: YP_001943959
• Protein GI: 189347430
• COG category: [R] General function prediction only
• COG ID: [COG0488] ATPase components of ABC transporters with duplicated ATPase domains

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTGAAG CCCGAAATCT CTCCCTCAGC GTAGGCACCA AGGAACTGCT TGCCGATTCA 
TCATTCCGTA TCGGCGACCG GGACCGCGTT TCGCTGGTCG GCATGAACGG AACCGGCAAG 
TCAACCCTGC TGAAACTTAT CAGCGGCACA TCGTCCGAAA GCACGATCGT AACCGAGGGG 
CAGTTTCTGA AATCGGCAGA TACCAGCATC GGTTACCTGC CCCAGGAAAT TTCCTTCGAT 
GACGATCTGG AAAAAACCGC ACTGCAGTAC GCCATGCATG CCAATATCCG TCTGTTCGAG 
CTTTCGGAAA CCATTGCACA ACTTGAACAC GAGCTTGCTT TGCCGGATCA GGATCATGCG 
GGCGAGGCCT ACCACAGGCT GATTGAACGG TTCACCGACG CCATGCACGA TTTCGATCAT 
CACGGAGGCT ATACCATGCG TGCCCAGGCT GAAAAAATGC TTTCGGGACT CGGATTCAGC 
GAAGCTGATT TTCACAAGAA AGTAAAGGCG TTTTCAGGAG GGTGGCAGAT GCGCCTCCTC 
ATTACCCGCC TTCTCCTGCA GAATCCTACC CTGCTCCTGC TCGACGAACC AACGAACCAT 
CTCGATATCG ATTCGCTTCG CTGGCTCGAG AACTATCTGC AGAACTATGA ACACAGCTGC 
ATTATCGTTT CGCACGACCG CTTCTTCCTC GACAAACTGA CGACGAGAAC CCTTGAAATC 
GCCTTTCAGC GCATCGAAGA GTACAAGGGA AACTACTCGT ATTACGAAAA GGAAAAAGCG 
GCCCGCTACG AGCTTATGAT GAGCCGGTAC GCAAACGATC TGAAAAAAGC CGCCGAGCTC 
AAGGCGTTCG TCGACCGGTT CCGATACAAG GCCACCAAGG CACGGCAGGC ACAAAGCCGG 
CTCCGCCAGC TTGAAAAACT CGAACAGGGG CTGCAGGCGC CTGAAGAGGA TCTCTCGCAG 
ATATCCTTCA GGTTTCCCAA GGCAAATCCT TCGGGCCGCG AGGTCATGCG ACTCGAGGGT 
ATCGGCAAAA CCTACACCCT GCCGGACGGC ACCCCAAAGC AGGTGCTCCG TAATATCAAT 
CTCGAGGTTC TCCGAGGCGA CCGCATCGCC ATAGTCGGAT CGAACGGAGC GGGAAAAACC 
ACTTTCTGTA AAATCCTTGC GGGTGAAATC GATTTTGAAG GAAAGCTTTC GACCGGACAC 
AATGTCAGCC TGAACTATTT CGCCCAGCAT CAGACCGAAA ATCTCGATAC TGAAAAAACC 
GTTTACAAGG AGATGCTCGA TGCCGCTCCG ACTTCGGAAG CCCAGAAAAA AATACGCGAC 
ATCCTCGGCT GTTTCCTTTT CAGCGGTTCT GCAGTCGAAA AAAAAATCGG AGTGCTGTCG 
GGAGGTGAAA AATCGCGGGT TGCCCTGGCC CGAATACTGC TTCAGGCTTC GAATCTGCTG 
ATCATGGATG AACCGACCAA CCACCTCGAC ATGCGCTCGA AAGAGATGCT GATCGATGCG 
CTTGAAAACT ATGACGGCAC CCTGCTGCTG GTCAGCCATG ACCGATACTT CCTCGACAGT 
CTGGTCAACA AGGTCATTGA AATCAAGAAC GGCGGACTGC AGCTCTACCA CGGAACCTAC 
GCAGAATATC TTGAAAAGGC CGAAAAAGCC CTCGAGGAGG AGAGAGTGCT GGAGAGTGCA 
CGGCAGAAAG CCGAAGCTGC AGCAGCAAAA ATCAGTAAAG TTCCCCAGGC AAAACCTGCT 
CCTGCGCCTA AAAAAAATCA CAGGAAAATC GAGTCGATCG AAAAAAACAT ACAGGCGCTC 
GAACAGCGGA AGGAGAACCT GGAAACGGTC ATGGCATCCG ATGAGTTTTA TAAACAGTCT 
CCTGAAGCGA CAAAAAAAAC ACTCGCCGAG TACCATACTC TCGGGGCCGA ACTCGACCGG 
CTTTTTGCCG ATTGGGAAAA AGCAACGTCC TGA 

 

Protein sequence

MFEARNLSLS VGTKELLADS SFRIGDRDRV SLVGMNGTGK STLLKLISGT SSESTIVTEG 
QFLKSADTSI GYLPQEISFD DDLEKTALQY AMHANIRLFE LSETIAQLEH ELALPDQDHA 
GEAYHRLIER FTDAMHDFDH HGGYTMRAQA EKMLSGLGFS EADFHKKVKA FSGGWQMRLL 
ITRLLLQNPT LLLLDEPTNH LDIDSLRWLE NYLQNYEHSC IIVSHDRFFL DKLTTRTLEI 
AFQRIEEYKG NYSYYEKEKA ARYELMMSRY ANDLKKAAEL KAFVDRFRYK ATKARQAQSR 
LRQLEKLEQG LQAPEEDLSQ ISFRFPKANP SGREVMRLEG IGKTYTLPDG TPKQVLRNIN 
LEVLRGDRIA IVGSNGAGKT TFCKILAGEI DFEGKLSTGH NVSLNYFAQH QTENLDTEKT 
VYKEMLDAAP TSEAQKKIRD ILGCFLFSGS AVEKKIGVLS GGEKSRVALA RILLQASNLL 
IMDEPTNHLD MRSKEMLIDA LENYDGTLLL VSHDRYFLDS LVNKVIEIKN GGLQLYHGTY 
AEYLEKAEKA LEEERVLESA RQKAEAAAAK ISKVPQAKPA PAPKKNHRKI ESIEKNIQAL 
EQRKENLETV MASDEFYKQS PEATKKTLAE YHTLGAELDR LFADWEKATS