Gene Clim_1895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1895 
Symbol 
ID6354949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2097826 
End bp2098746 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content54% 
IMG OID642669493 
ProductIntegrase catalytic region 
Protein accessionYP_001943907 
Protein GI189347378 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.875209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCGC GTAAAAACTG GATCAGCGAC AAAGAACAGT TGTCGGTATC TACCCAATGT 
GAACTTGCCG GAGTAACCCG GTCAGGGTAC TACGGGCAAA GTAAAAGCCT CATGCCAAAT
ACTGAAGATC TGGAACTGAT GAAGCTTATC GACGAGGAGT ACACCCGACA TCCGTTTTAT
GGAAGCCGAC GGATGAAGCA GGTCCTGCTC ACCCAAGGGC GCAAGGTCAA CCGGAAACGA
GTACAGCGCC TGATGCGTAA CCTGGGGCTT GCGGGTATGG CTCCAGGGCC CAATACCAGC
AAACCGCATC CGCAGCACAA GATCTATCCA TACCTGTTGC GAGGTCTTTC CATTACCAGA
CCGAACCATG TCTGGTCTAC CGATGTGACC TATTGCCGGT TACCCGGCGG CTTCATGTAT
CTGACGGCCG TCATCGACTG GTATTCCCGC AAGGTGCTGG CATGGAGGCT TTCGAATTCC
CTGGATAGCA GCTACTGTGT TGATTGTCTG GAAGAAGCTA TCCGCAAGTA CGGAACGCCG
GAAATCTTCA ACACCGATCA GGGCGTTCAG TACACCAGTG ATGCGTTCAC CAGCGTGCTC
AAGAGCCATG AGATCCGCAT CAGCATGGAT GGCCGTGGCC GGGCCCTGGA CAATGTTTTC
GTCGAGCGGT TATGGCGGAA TGTCAAGCAG GAAGACCTGT ACCTGAAAGG CTATGAAACA
GCGGTAGAAA TGATGCGGGG ATTCGCCGAA TATTTCCGTT TTTACAATAT CGAGCGGCCT
CATCAGTCGC TGGGGTACAA AACCCCGGAC GAGGTGTATG AAAGCGCCAT AGGAGGCGGA
GCACGCATTG TCGACAAGTT CTCTAAGAGT GTCTCCGAAG GGTCGTCGGA GGCTACAGGG
CCGCAACAGG AAGCGGCATA A
 
Protein sequence
MKARKNWISD KEQLSVSTQC ELAGVTRSGY YGQSKSLMPN TEDLELMKLI DEEYTRHPFY 
GSRRMKQVLL TQGRKVNRKR VQRLMRNLGL AGMAPGPNTS KPHPQHKIYP YLLRGLSITR
PNHVWSTDVT YCRLPGGFMY LTAVIDWYSR KVLAWRLSNS LDSSYCVDCL EEAIRKYGTP
EIFNTDQGVQ YTSDAFTSVL KSHEIRISMD GRGRALDNVF VERLWRNVKQ EDLYLKGYET
AVEMMRGFAE YFRFYNIERP HQSLGYKTPD EVYESAIGGG ARIVDKFSKS VSEGSSEATG
PQQEAA