Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1881 |
Symbol | |
ID | 6355222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 2087015 |
End bp | 2087779 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642669481 |
Product | HpcH/HpaI aldolase |
Protein accession | YP_001943895 |
Protein GI | 189347366 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAACA CTCGCTTGAA AGGACAACTC AAAAACAATG AGCAGACACT GGGCTCCTGG GTCACCATCG GTCATCCGGC TGTAGTGGAA GTCCTGTCCA ATGCCAATTT TGACTGGTTG ACCATTGATA TTGAGCATAA TAACATCGAT CCAGCTATGT TGACCACTCT GATCGCCACG ATACAGAGCA AGAATATTGC AGCTTTGGTC AGGGTATCCA AGAATGAAGA AGTCCCGATC AAGCATGCTA TGGATGCCGG GGCGGATGGA GTGATTGTTC CAATGGTAAA TTCACGTGAG GACGCTGAAA AAGCAGTGGA ATATGTAAAA TACCCTCCCC GCGGAAAACG GGGAGTTGGT TTGAGTCGTG CCCAGAACTA CGGAATAGGA TTTGAATCAT ACAAGCAATG GCTCCAGGCT TACAGCGTAA TCATTGCACA GATTGAGCAT ATTGATGGTG TTCGGAATAT CGAGCAAATC ATTGAAGTAC CAGATATTGA CGCTATTATC ATAGGCCCCT ACGACCTTTC CGGTTCACTA GGATATCCGG GTAACTATTC TCGCGAGGAT GTGCGGGAAG CCCTGATTCG GGTGGAACAG GTCTGTCGGG AAAGGAACTT CCCAATGGGC TTTCATGTTG TACCACCCGA TGTGGAAGAA GTGGCCATAA GAAGGGCGGC TGGCTATTCC TTTATTGCAT TTAGCACGGA CTTTCTGCTG ATGGGAGATA CTGCCACCAA ACTGGTTAAT CATCTGCGCA AATAG
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Protein sequence | MKNTRLKGQL KNNEQTLGSW VTIGHPAVVE VLSNANFDWL TIDIEHNNID PAMLTTLIAT IQSKNIAALV RVSKNEEVPI KHAMDAGADG VIVPMVNSRE DAEKAVEYVK YPPRGKRGVG LSRAQNYGIG FESYKQWLQA YSVIIAQIEH IDGVRNIEQI IEVPDIDAII IGPYDLSGSL GYPGNYSRED VREALIRVEQ VCRERNFPMG FHVVPPDVEE VAIRRAAGYS FIAFSTDFLL MGDTATKLVN HLRK
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