Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1798 |
Symbol | |
ID | 6354627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 1977510 |
End bp | 1978016 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642669401 |
Product | lipoprotein signal peptidase |
Protein accession | YP_001943816 |
Protein GI | 189347287 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0597] Lipoprotein signal peptidase |
TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.226903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATGGT TTTTCACCTT TGCCTCCGTA GTTGTGCTTC TTGACCAGTT CACAAAAAAA CTTGCCGTCC TGTTTCTCCG CGACCGCGGC ACCGTCACCA TTATCCCGGA CTGGCTGAAA CTCACCTATG CCGAAAACAA CGGCATAGCG TTCGGAGTCG AATTCGCCTC CCAGGCGATC ATGATCCTGC TGGTAGGGAG CATATCGCTC ATGATAGCCC TCTACGTACT GAAATCAGGA AACCGCAAGA CCCTCTTTCT GCTTCCCTTT TCGCTCATTT TCGGGGGAGG CATCGGCAAC CTTATCGACC GGCTCACGGT CGGCAGGGTT ATCGACTTCA TCCATTTCGA CCTTTATCAG GGTACCATCA TGGGATCCTG GGTATCGCTC TGGCCGATAT TCAATGTAGC CGACTCCGCG ATCACCATCG GCGCATGCAT GCTTATACTC CTGCACAACA GGATTTTCCC CGAACCCGAT ACGAAAGCCG AAAACCATGT ACGTTGA
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Protein sequence | MKWFFTFASV VVLLDQFTKK LAVLFLRDRG TVTIIPDWLK LTYAENNGIA FGVEFASQAI MILLVGSISL MIALYVLKSG NRKTLFLLPF SLIFGGGIGN LIDRLTVGRV IDFIHFDLYQ GTIMGSWVSL WPIFNVADSA ITIGACMLIL LHNRIFPEPD TKAENHVR
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