Gene Clim_1689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1689 
Symbol 
ID6353996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand+ 
Start bp1858016 
End bp1859020 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content52% 
IMG OID642669294 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_001943710 
Protein GI189347181 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAG TAAAAGTAGG CATTAACGGA TTCGGCCGGA TCGGACGACT GGTACTCCGT 
CAGGCCATGA ATAACCCGAA ATTCGAAATT GTTGCGATCA ACGACCTTTG TGATACCAAA 
ACGCTCGCAC ACCTGCTGAA ATACGATTCA ACCCACAAAA AATTCAACGG TGAGGTTTCA 
ACCGAAGGCG ATAATATCGT CATCAACGGC CAGACCATCA CCATTTCCGC ACAGAGAGAT 
CCCGCCCAGC TTCCCTGGCA GGCGCTCGGT TGCGACATGG TCGTTGAATC AACCGGTTTA 
TTCACCAGTC GCGAAGCTGC CTCCAAGCAT ATTACCGCTG GGGCAAAGAA AGTTATCATC 
TCCGCACCGG CAAAGGACAA AATCGATGCC ACCATCGTTA TGGGCGTCAA TGAAAACTCC 
ATCACCGGCA ACGAAGAGAT CATTTCCAAC GCAAGCTGCA CCACCAACTG TCTGGCTCCG 
ATGGTAAAAG TCCTTCAGGA CACCTTCGGC ATCACCAAAG GATTCATGAC AACGGTTCAC 
GCTTATACCA ACGATCAGAA CATCCTCGAT CTTCCGCACA AGGATCTCCG CCGCGCCCGC 
TCAGCTGCGC TCTCGATCAT TCCGACAAGC ACCGGAGCGG CAAAAGCCAT CGGTGAAGTC 
ATTCCCGAGC TTGCAGGCAG ACTTGACGGT TTTGCTATGA GGGTTCCGGT ACCGGACGGT 
TCGGTAACCG ATCTGACCGC CATTCTCGAT CGTGAAGCAT CAAAAGCCGA AATCAACGCA 
GCAATGCAGG CCGCTGCAGA GGGCCCGATG AAAGGATATC TCGAATACTG TACAGATCCG 
ATCGTCTCCC AGGATATCGT AGGCAACGCC CACTCCTGTA TCTTCGATTC GCTCCTGACC 
ATGAGCTCCG GAAATATGGT GAAAGTTGTC GGCTGGTACG ACAACGAACT CGGCTATTCG 
ACAAGGGTTG TCGATCTTCT TGAAATCTAT GCCAACTTCG TCTGA
 
Protein sequence
MAKVKVGING FGRIGRLVLR QAMNNPKFEI VAINDLCDTK TLAHLLKYDS THKKFNGEVS 
TEGDNIVING QTITISAQRD PAQLPWQALG CDMVVESTGL FTSREAASKH ITAGAKKVII 
SAPAKDKIDA TIVMGVNENS ITGNEEIISN ASCTTNCLAP MVKVLQDTFG ITKGFMTTVH 
AYTNDQNILD LPHKDLRRAR SAALSIIPTS TGAAKAIGEV IPELAGRLDG FAMRVPVPDG 
SVTDLTAILD REASKAEINA AMQAAAEGPM KGYLEYCTDP IVSQDIVGNA HSCIFDSLLT 
MSSGNMVKVV GWYDNELGYS TRVVDLLEIY ANFV