| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1603 |
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| Symbol | |
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| ID | 6354251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 1730015 |
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| End bp | 1731499 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642669204 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001943626 |
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| Protein GI | 189347097 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00909] amino acid transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0963262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGAACA GTTTCAGGAA AAAACCACTT TCGCAGTTAC TCGATGAAGT TAACGGCGAA
AACCGTCTGA ACAGGATTCT CGGCCCTGTT GCGCTCACCA GCCTTGGTGT CGGAGCCATC
ATCGGCACAG GCATTTTCGT GCTTATCGGC GTCGCTGCGC ATGACAAGGC TGGTCCAGCT
GTCTCGCTTT CTTTTGCGGT CGCAGGACTT GCCTGTATTT TCGCGGCGCT CTGCTATGCC
GAGTTCGCCT CGATGGTTCC CGTCGCCGGT TCCGCCTACA CTTACGCCTA CGCTACCCTC
GGCGAACTTT TCGCCTGGAT TATCGGATGG GATCTCATTC TTGAATATGC TGTCGCATCA
GCGACGGTTG CGCATGGATG GTCGCACTAT TTTCAGGACT TCATAGGCAT ATTCGGGCTC
GGGGTTCCCG CGGCCTTTTC CCGAGCACCG CTTGATTTCG ATCCTGAAAC CGGTATGCTT
GTGCTCACCG GATCGCTTTT CGACCTGCCT GCCGTGCTTA TTGTCGGCAT CATCACAGTA
ATTCTCGTCA AGGGCATAAG GGAGAGTTCG GGCTTCAATA CCGCTATGGT TATCATCAAG
GTAGCTATCG TCCTGCTTGT CATCGTGCTC GGTTCTCAAT ATGTCGATCC TGCAAACTGG
CAGCCATTCG CGCCGTTCGG TTATTCAGGT CTGAGTGTTT TCGGACACCT CGTGCTTGGC
GAACCCGGAC TCGGAGGGGC ACCGGTAGGC GTGCTGGCCG GTGCGGCCAT GATCTTTTTC
GCCTATATCG GCTTCGATTC AATTTCCACC CATGCCGAAG AGGCAAGAAA TCCCCAGAAA
GACATTCCCA TCGGCATCAT TTCTTCGCTC ATCGTCTGTA CCGTACTCTA TATAGCCGTT
GCTACGGTCA TCACCGGTAT GGTTCCCTAC AACGAAATCA ACATCGACGC TCCGGTGTCG
CACGCTTTCA GCAGGGTGGG TCTCGGATGG GCGCATTTCA TCATCTCACT GGGAGCGATA
GCAGGCATCA CCTCCGTGCT GCTTGTCATG ATGCTGAGCC AGCCGCGCAT TTTCCTTGCA
ATGGCGCGCG ACGGTCTGCT GCCGAAAAAC ATCTTCGGGG CCATTCACGA GAAGTTCAGG
ACCCCCTGGA AATCCACAAT TCTCACCGGC ATTTTCGTTG CCGTCATGGG TGGGCTGCTA
CCGCTCCGTC TGCTTGCCGA ACTGGTCAAT ATCGGTACAC TTTTCGCCTT TGTGGTCGTC
TGCGCCGCAG TGCTTATCAT GCGTCGCAAA CATCCGGAAG CTGAACGCCC TTTCAAAGTC
CCGTTTATGC CGTTCGTACC CATAGCCGGC ATTCTTACCT GCCTGCTGCT CATGTTCTCG
CTACCTGCCG AAAACTGGAT CAGGTTGCTG GTCTGGCTTC TTATCGGCAT TACTATTTAC
TTCTTTTACG GAAGGCACCA CAGCGAGCTG AACAAGGCGC ACTGA
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| Protein sequence | MKNSFRKKPL SQLLDEVNGE NRLNRILGPV ALTSLGVGAI IGTGIFVLIG VAAHDKAGPA
VSLSFAVAGL ACIFAALCYA EFASMVPVAG SAYTYAYATL GELFAWIIGW DLILEYAVAS
ATVAHGWSHY FQDFIGIFGL GVPAAFSRAP LDFDPETGML VLTGSLFDLP AVLIVGIITV
ILVKGIRESS GFNTAMVIIK VAIVLLVIVL GSQYVDPANW QPFAPFGYSG LSVFGHLVLG
EPGLGGAPVG VLAGAAMIFF AYIGFDSIST HAEEARNPQK DIPIGIISSL IVCTVLYIAV
ATVITGMVPY NEINIDAPVS HAFSRVGLGW AHFIISLGAI AGITSVLLVM MLSQPRIFLA
MARDGLLPKN IFGAIHEKFR TPWKSTILTG IFVAVMGGLL PLRLLAELVN IGTLFAFVVV
CAAVLIMRRK HPEAERPFKV PFMPFVPIAG ILTCLLLMFS LPAENWIRLL VWLLIGITIY
FFYGRHHSEL NKAH
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