| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1553 |
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| Symbol | |
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| ID | 6354200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 1673266 |
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| End bp | 1674519 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642669158 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001943581 |
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| Protein GI | 189347052 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000144272 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTGAAC GCACTGTTTT TCATTATCAG GACAATGTTC TCTGTTGTGA GGACGTCCGG
CTGGATGAGC TTGCCGGAAT CTACGGAACG CCGCTTTTCG TTACCTCGAA AAGGAGTCTG
GAAGGAAGTT TGCGGGAATT CGAGGCGGCA TTCGCTTCGC TGCCGCATAT TACCTGTTAC
TCCGTAAAGG CAAATTTCAA TCTTAGTGTT ATCAGTACGT TAGCCGGAAT GGGCTGCGGA
TGTGACGTGA ACTCCGGCGG CGAGCTTTTC AGGGCTCTTA AAGCAGGAGT TTCTCCGGAA
AAAATCATTT TTGCCGGTGT CGGAAAAAAA CCAGAAGAGA TCGCTTTCGC GCTTGAAGCC
GGAGTGCTCA TGCTGAAGGT CGAGTCGCTT TCCGAACTCG AGGCTATCGA ACGGATAGCA
GCTGAAAAAG GCTTAACGGC TCCCGTTGCG CTCAGAATCA ATCCCAATGT AACTGCGGAA
ACGCACCCCT ATATCACTAC CGGCGACAGC AAGGAGAAAT TCGGCATCGA CGAGGCCGGT
CTTGAAGAGG CCTTCTCGCT CCTGCGGCGC ATGAAACATG TTCGTCTTGT CTGTCTTGAT
ATGCATATCG GCTCCCAGAT TTTCGATCCG GAGTACTATG TTGCGGCGAC TGCCGTGCTT
CTCGATATTT TCGAAACTGC AAGATCTCTC GGTTTTTCAA TCGAGTATCT TGATATCGGA
GGAGGTTTCC CGGTAACCTA CGACGCCCGT AAACCGGCAA CTCCGATTAC GTATTTTGCG
GAAAAGCTGA TGCCACTGCT GGCTGCTGCC GGAGTTCCGG TTATTTTCGA GCCGGGCCGT
TTTCTGGTGG CTAACGCGTC GGTACTGCTT TCGAGGATAC TTTATAAAAA AACGAATCAT
ACCGGAAAGC AGTTTTACAT TGTCGATGCC GGCATGACCG AACTGATTCG TCCCGCGCTC
TACCAGTCGC ATCACGAAGT ATTGACAGTT ATCCGTCACG AAAAAACCGT TGTTGCCGAT
GTGGTCGGGC CGGTTTGTGA GTCAAGTGAC TTTTTTGCTC GTCAGCGCAC CATCGATGAT
GCCGCTGAAG GGGAATTGCT TGCCGTGATG TCGTCGGGTG CGTATGCTGC GGTAATGAGC
AGTAACTATA ACGGAAGATT GCGTCCTGCT GAAGTTATGG TGGATGGCCA GGAGGTCACG
GTGATTCGCA GGCGAGAGAC CTACGAACAG CTTATAGCAA ACGAGGTACT GTAG
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| Protein sequence | MSERTVFHYQ DNVLCCEDVR LDELAGIYGT PLFVTSKRSL EGSLREFEAA FASLPHITCY
SVKANFNLSV ISTLAGMGCG CDVNSGGELF RALKAGVSPE KIIFAGVGKK PEEIAFALEA
GVLMLKVESL SELEAIERIA AEKGLTAPVA LRINPNVTAE THPYITTGDS KEKFGIDEAG
LEEAFSLLRR MKHVRLVCLD MHIGSQIFDP EYYVAATAVL LDIFETARSL GFSIEYLDIG
GGFPVTYDAR KPATPITYFA EKLMPLLAAA GVPVIFEPGR FLVANASVLL SRILYKKTNH
TGKQFYIVDA GMTELIRPAL YQSHHEVLTV IRHEKTVVAD VVGPVCESSD FFARQRTIDD
AAEGELLAVM SSGAYAAVMS SNYNGRLRPA EVMVDGQEVT VIRRRETYEQ LIANEVL
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