| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1552 |
|---|
| Symbol | |
|---|
| ID | 6354199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | + |
|---|
| Start bp | 1672341 |
|---|
| End bp | 1673213 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642669157 |
|---|
| Product | 5,10-methylenetetrahydrofolate reductase |
|---|
| Protein accession | YP_001943580 |
|---|
| Protein GI | 189347051 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0685] 5,10-methylenetetrahydrofolate reductase |
|---|
| TIGRFAM ID | [TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.000427747 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGTCA GAGAGATCCT GAACTCCGCG AGTGAGCCCG TATTCAGTTT TGAATTCTTT
CCGCCTAAAA AGGACGAAGA TTGGGAGACG CTCTTTGAGA CAATAGCCAA CCTGAACCAT
CTGCATCCAT CTTACGTCAG CGTCACATAC GGAGCGGGAG GTTCGACGCG TTCGAGAACG
CACGACCTTG TCACGAAAAT CCAGAAGGAA ACCGGACTGA CCGTGGTTTC CCACCTGACC
TGCATCTGTT CCGACCGTGA AGATACCGCT TCGATTCTTG AAAACTACCT CGAACACGGC
ATCACCAACG TGCTTGCACT TCGGGGAGAC AAACCTGCCG GAATAGCCAC TCTGAACGAT
GCCATCAAGG ATTTTCCCCA CGCCATCGAC CTCATACGAT TCATCAAAAC CAACTATCCG
GCAATTGGCA TTGGTGTAGC CGGTTTTCCC GAAGGACATC CGGAAACTCC GAACCGCCTG
AAGGAGATCG AATACCTCAA GGAAAAGATC GATGCAGGTG CCGATTACAT TGTCACCCAG
CTTTTTTTTG ATAACCGGGA CTATTTCGAT TTTGTGGATC GATGCCGTAT AGCCGGAATA
ACGGTTCCCG TCATAGCCGG CATCATGCCG GTCTCAACAA AAAAAGGGAT GATCAGGATG
TCGGAACTGG CTCTTGGGGC ACGAATCCCG GCCCCTCTGC TTAAACAGGT ACTTCATGCC
CGGAACGACG TGGATGTAGC AAAAATCGGA ATTGACTGGG CTACTGCGCA AGTGCAGGAA
CTGATTGAAC GGCAGGTCAA GGGAGTTCAT TTCTATACCC TTAATCTTGC CGATGCAACC
CTGAAAATTT TCCGAAACAT CAGTATAGGC TGA
|
|---|
| Protein sequence | MLVREILNSA SEPVFSFEFF PPKKDEDWET LFETIANLNH LHPSYVSVTY GAGGSTRSRT
HDLVTKIQKE TGLTVVSHLT CICSDREDTA SILENYLEHG ITNVLALRGD KPAGIATLND
AIKDFPHAID LIRFIKTNYP AIGIGVAGFP EGHPETPNRL KEIEYLKEKI DAGADYIVTQ
LFFDNRDYFD FVDRCRIAGI TVPVIAGIMP VSTKKGMIRM SELALGARIP APLLKQVLHA
RNDVDVAKIG IDWATAQVQE LIERQVKGVH FYTLNLADAT LKIFRNISIG
|
|---|
| |