Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1516 |
Symbol | |
ID | 6355773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 1635036 |
End bp | 1636445 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642669123 |
Product | Radical SAM domain protein |
Protein accession | YP_001943546 |
Protein GI | 189347017 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0112694 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGACCG AACAATCCGA CACAGTGATA TCATCGTTTG CCCCCGCCGC AGGTTATTCC GAAGAGCTTC TGCACCAGCT CGCATCGAAA CAGAAATCAA GAAAAAAATG GCTGCTGGTT CAACCGGTCA GCAACACCAG CATGATGGTT GATTCCGGCA CAGTCAGTAT GCCGCTGAAC CTCATTATGG TTGCCACAAT AGCCGGAAAG CTCTTCGATG TCACGTTTAT CGATGAACGG CTCGGCGAAC AGGTTCCTGA TGATCTCTCG GGATATGATG TCATAGCAAT CACATCTCGT ACCCTTAACG CCAGTAAGGC CTACCGCATC GGCGATGCGG CGCTCCGTCA GGGAAAAATC GTCATTCTCG GGGGCGTGCA CCCTACCATG CTGCACGAAG AAGCTTCACA GCACTGCACC AGCGTCGTGT ACGGAGAGAT CGAATCGATC TGGACTGAAC TGGCGACTGA CGTGCTTACA GGAAAAATGC AGCCGATATA CCGGGCAAAA ACGCTCAAAC CGATGAGTGA TATGCACCGC CCGGATTTCA GTTATGCCCT CAACGCGAAA AACGCGAAAA AATACAGCTC ACTGATCCCC ATCCTCGCGA CCAAAGGATG TCCGGTCGGC TGTAATTTCT GCACGACGCC TACTATTTAC GGCAAAAATT ACCGGTACAG GGAACTCGAC CTCGTGCTCG AAGAGATGCG CTACCACCAG GAACGACTTG GCAAGCAGAA GATCAACTTC TCGTTCATGG ACGACAACAT CAGCTTCAGA CCGAAGTATT TCATGACGCT GCTCGAAGAG ATGGCAAAGC TCGGCGTGCA CTGGAACGCC AATATCTCCA TGAACTTCCT CGACAAACCC GAAGTCGCCG AACTGGCCGG ACGTTCAGGC TGCGACCTTC TCAGTATAGG GTTCGAATCG CTCAATCCAG AAACCCTGAA AAGCGTCCAG AAGGGTTCCA ACCGTCTCGG CAATTACGAA AAGGTTGTCA GCAACCTGCA TAACAACGGT ATCGCCATAC AGGGTTATTT CATGTTCGGT TTCGACAACG ATACCGAAGA GAGCTTCCAG CTCACTTACG ACTTCATCAT GAAAAACCGC ATCGAGTTCC CGGTATTTTC ACTGGTGACG CCCTTCCCCG GAACGCCCTA CTTCGATGAA ATGAAATCCC GTGTACGACA TCTCGACTGG GACAAGTACG ACACCTACCA CTATATGTTC GAGCCGAACA AAATGAGCGG CGAAAAACTT CTCGAAAACT TCGTTAAACT GCAGAAAGAG GTTTACAAGG GCCGCTCGAT CATGCAACGC ATGAAGGGCA AACCGCTGAA CTGGGTATGG TTCGTGAACT ACATGATGCA CCGCTTCACC AAAAAGCTCT CGCCGGAATA TTACTACTGA
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Protein sequence | MQTEQSDTVI SSFAPAAGYS EELLHQLASK QKSRKKWLLV QPVSNTSMMV DSGTVSMPLN LIMVATIAGK LFDVTFIDER LGEQVPDDLS GYDVIAITSR TLNASKAYRI GDAALRQGKI VILGGVHPTM LHEEASQHCT SVVYGEIESI WTELATDVLT GKMQPIYRAK TLKPMSDMHR PDFSYALNAK NAKKYSSLIP ILATKGCPVG CNFCTTPTIY GKNYRYRELD LVLEEMRYHQ ERLGKQKINF SFMDDNISFR PKYFMTLLEE MAKLGVHWNA NISMNFLDKP EVAELAGRSG CDLLSIGFES LNPETLKSVQ KGSNRLGNYE KVVSNLHNNG IAIQGYFMFG FDNDTEESFQ LTYDFIMKNR IEFPVFSLVT PFPGTPYFDE MKSRVRHLDW DKYDTYHYMF EPNKMSGEKL LENFVKLQKE VYKGRSIMQR MKGKPLNWVW FVNYMMHRFT KKLSPEYYY
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