Gene Clim_1512 details

Gene Information

• Locus tag: Clim_1512
• ID: 6354828
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: +
• Start bp: 1629113
• End bp: 1632274
• Gene Length: 3162 bp
• Protein Length: 1053 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 642669117
• Product: beta-phosphoglucomutase family hydrolase
• Protein accession: YP_001943542
• Protein GI: 189347013
• COG category: [G] Carbohydrate transport and metabolism; [R] General function prediction only
• COG ID: [COG0637] Predicted phosphatase/phosphohexomutase; [COG1554] Trehalose and maltose hydrolases (possible phosphorylases)
• TIGRFAM ID: [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; [TIGR02009] beta-phosphoglucomutase family hydrolase

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAACG TATTTAAAGG TGCAATTTTT GATCTTGACG GAGTGATCAC CGGTACGGCG 
AAAGTTCACA GCCTTGCCTG GGAATCCATG TTCAACTCGT TTCTGAAAAG TTATGCCGAA 
GTGAACAATG AGCCATTTGT TCCATTCGAT CCGGTTCATG ATTATCATAA ATATGTTGAC 
GGAAAACCCC GCATGGAAGG CGTAAAAAGC TTTCTGGCTT CACGCAATAT TGAGTTGCCG 
TTCGGAGAAC TCGACGATAT TTCCGAAAAA GAGACCATAT GCGGTCTTGG AAACAGGAAA 
AACACTCTTT TTACCGAAAT CCTGATCAAG GAAGGCCCTG AAGTTTATAC ATCATCGGTA 
GAACTGATTG AAAATCTGAT AGCAAAAGGC ATCCGCATCG GCATTGCGTC TTCAAGCCGA 
AACTGCCGGA TGATCCTGCA GCTTGCCAGG CTTGAGCATC TTTTCGAAAC GAGAGTCGAT 
GGAGAAGTTT CCATAGAAAT GAATCTGAAA GGGAAACCGA ATCCGGATAT TTTCGTTACT 
GCAGCAAGAA ACCTTGGACT GGAACCGCAT GAATGCGTCG TAGTCGAGGA CGCCATATCC 
GGAGTACAGG CTGGATCTCG CGGAAATTTC GGTATGGTAC TCGGCATTGC AAGGGAGATA 
GAGGGAACGA AACTGAAAGA AGAGGGTGCG GATATCGTCG TCAGGGACCT CGGAGAGATC 
ACTCTTGAAG ATATTGAGCA GTGGTTCAGC GATGGCCTTG AAAAAGATTG CTGGAACCTT 
TCCTATGACA GCTTTATCGC CCGTGACGAA AAACTCAGAG AGGCACTTAC CTCTATAGGT 
AACGGATACC TTGGAGTCAG GGGTGCTTAT GAAGGAGTGG CCGCTTCGCA CTACCACTAT 
CCCGGCACCT ACATCGCCGG CATCTATAAC CGTCTGCCAA CGGATGTGCA CGGGCAGACC 
GTATTCAACA ATGATTTCGT TAACTGTCCG AACTGGCTGC CGATAGAGTT CAGAATAGGC 
GGCGGCGATT TCATCGATCC GTTTGCACAG AAAATCCTCA GTTACCGCCA GAACCTCGAC 
CTGCGGAATG CGGTTATGGA ACGGGAAATC GTTATTCAGG ACAATCTGGG CAGAATCAGC 
AGAATCAACA GCCGTCGCTT TGCAAGCATG GCCGATCCGC ACCGTTGTGC CCTTCGCTTC 
AGCCTCCGTC CGGTCAACTA TACGGCAACC GTCGAGTTTC GCTCCGCAAT TGACGGCACC 
ATTCAGAACA AGGGTGTTGC CCGGTACAAT GAGCTCTCCT CCGATCACCT CGAACATATC 
GAAGGAAGCT GTGATAAGGA GATAATGGCT CTGCACGTCC GCACAAGCCA ATCGCATTAC 
GGCATTGCGA CAGCTGCAAA AACAAGAGCG ACCTGCCATG GACAGCCTGC TGCAACCGAA 
CGTACGGAAA ACACCTGTGA ACGCTATATC AGTCAATCTT TCAGGATGCA GCTCAGCCCC 
GATAAAAGCT GCACTATCGA AAAACTCGTT GCCATCCATA CCTCTCTGGA TCATAACGGC 
AAGCTCAGTC CACTCGCTGC AGCAAAACAA TCGCTGCAGA CAGATGAAAC CTTTGATTCG 
CTGCTGCAGG ATCATATTGC AGCATGGGAA AAAATCTGGC TGGAAGCAGG CCTTTCTCTC 
GAAGGCGACC GCTTCAGTCT GAAAGTACTT CGCCTGCACA CCTATCACCT GATGTGCTCT 
GCTTCTCTCC ATAACAGAAA CATCGATGCA GGCATAACGG CAAGGGGCTT GAATGGCGAA 
GCTTACCGGG GTCATATCTT CTGGGATGAG ATATTTATTC TGCCGTTCTT TAACAGAACC 
TTCCCTGAAA TTTCCAGAGC ACTGCTCATG TACCGCTACA ACAGGCTCGA CGCAGCAAGA 
GAATACGCCC GTGAAAACGG TTACAGAGGA GCCATGTACC CCTGGCAGAC TGCCGATGAC 
GGACAGGAAG ACACCCAGAT CATTCATTTC AATCCGAAAA GCGGAAGCTG GGGCCCGGAT 
CTCAGCCGCA AGCAACGCCA TGTCTCTATT GCGGTTTTCT ACAATACATG GAGCTATATC 
TACAATTCCG GCGACACCGC ATTTCTTGAT GAGTACGGCG CCGAACTGAT GTTTGAAATC 
GCCCGTTTCT GGGCCAGCAT TGCAACCTTT TCAAAGGAAA CGGGAAAATA TCATATCGAA 
GGGGTCATGG GACCGGACGA GTTTCATGAA ACACTGCCGG GAAGCGGTGT GGAAGGAATA 
AAAGACAACT CCTATACCAA CATCATGGTA GTCTGGCTTT TCGAGAAAGC CGTAGAGATC 
AGTGAAACCA TCGATGAAAC CGCATTGAGA AACCTGCTTG AAAAAATCCA TCTCGGATTT 
GACGAGCTGC AGAAATGGCG CGATATCAGT ACCTCAATGA ATATTCTGAT TGACAGCGAG 
GGAATTCTGG AACAGTTCGA CGGTTACATG AGCCTCAAGG AGCTCGACTG GGTTCATTAC 
CGCTCTACAT ACGGCAATAT TCATCGCATG GACCGCATTC TCAAGGCGGA AGGCGATACC 
CCCGATCATT ACAAGGTAGC CAAGCAGGCC GATGTGCTGA TGACGTTCTA CACGCTCGCA 
CCATCAGAAG TAGCTCATCT TCTTGAAAAA AACGGCTATT CCGTGCCCGA TCCGGGTAAA 
CTGGTTCGCG AAAACTACGC TTACTACGAA CCGAGAACCA GCCATGGCTC AACGCTGAGC 
AAAGTCGTTC ATTCCATTAT TTCCAGCTAT CTTGACGACG GCCATGAAAC GGCATGGAAA 
TGGTTTCTCG AAGCGCTTAA AAGCGATATC AACGACACTC AGGGAGGCAC CACGCAAGAG 
GGCATCCACA GTGGCGTAAT GGCTGGAACT CTTGATACGG TAGTAAGATA CTTTGCCGGC 
ATATCGTTTG AAAACGGCAT GCTCAATGTA AACCCGAACC TGCCGGCTCA CTGGAAAAAA 
CTCGATCTCA ACGTCTGTTT CCGGGAGAAC AGCTATGCAA TCACGCTCAC TCCGGAATCC 
ATAACCGTGA TGCTGAGAAA TTCAGAAAAC GAGGAGGCTC CGGCCTGTAT AGCCGGCGAA 
CCCGTTACCC TGCAGAAAGG GACTTCTGTT GCAATGGCAT AA 

 

Protein sequence

MSNVFKGAIF DLDGVITGTA KVHSLAWESM FNSFLKSYAE VNNEPFVPFD PVHDYHKYVD 
GKPRMEGVKS FLASRNIELP FGELDDISEK ETICGLGNRK NTLFTEILIK EGPEVYTSSV 
ELIENLIAKG IRIGIASSSR NCRMILQLAR LEHLFETRVD GEVSIEMNLK GKPNPDIFVT 
AARNLGLEPH ECVVVEDAIS GVQAGSRGNF GMVLGIAREI EGTKLKEEGA DIVVRDLGEI 
TLEDIEQWFS DGLEKDCWNL SYDSFIARDE KLREALTSIG NGYLGVRGAY EGVAASHYHY 
PGTYIAGIYN RLPTDVHGQT VFNNDFVNCP NWLPIEFRIG GGDFIDPFAQ KILSYRQNLD 
LRNAVMEREI VIQDNLGRIS RINSRRFASM ADPHRCALRF SLRPVNYTAT VEFRSAIDGT 
IQNKGVARYN ELSSDHLEHI EGSCDKEIMA LHVRTSQSHY GIATAAKTRA TCHGQPAATE 
RTENTCERYI SQSFRMQLSP DKSCTIEKLV AIHTSLDHNG KLSPLAAAKQ SLQTDETFDS 
LLQDHIAAWE KIWLEAGLSL EGDRFSLKVL RLHTYHLMCS ASLHNRNIDA GITARGLNGE 
AYRGHIFWDE IFILPFFNRT FPEISRALLM YRYNRLDAAR EYARENGYRG AMYPWQTADD 
GQEDTQIIHF NPKSGSWGPD LSRKQRHVSI AVFYNTWSYI YNSGDTAFLD EYGAELMFEI 
ARFWASIATF SKETGKYHIE GVMGPDEFHE TLPGSGVEGI KDNSYTNIMV VWLFEKAVEI 
SETIDETALR NLLEKIHLGF DELQKWRDIS TSMNILIDSE GILEQFDGYM SLKELDWVHY 
RSTYGNIHRM DRILKAEGDT PDHYKVAKQA DVLMTFYTLA PSEVAHLLEK NGYSVPDPGK 
LVRENYAYYE PRTSHGSTLS KVVHSIISSY LDDGHETAWK WFLEALKSDI NDTQGGTTQE 
GIHSGVMAGT LDTVVRYFAG ISFENGMLNV NPNLPAHWKK LDLNVCFREN SYAITLTPES 
ITVMLRNSEN EEAPACIAGE PVTLQKGTSV AMA