Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1473 |
Symbol | |
ID | 6354786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 1578898 |
End bp | 1579479 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642669080 |
Product | pentapeptide repeat protein |
Protein accession | YP_001943508 |
Protein GI | 189346979 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.978598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAGG AGAACACAGA ACTTACCGAG AACGGGATTT TCGAGAACAT CGTCTTCGAC TCCGAAAACC CGGCTCGCGG CATGTACGAG GAGTGCCGCT TTCTGCGCTG CGGCTTCGCC AATGCGGATC TTTCAGGCGT GACCTTCAGA AACTGCGCTT TCGATGGGTG CGATTTCAGC CTTGCAAAGC TGAACAACAC CAGCCTGCAG GATGTCCGGT TCAGGGAGTG CAAGCTGCTC GGCCTGCAGT TCGGCGATTG CCGCACCTTT CTTCTGGAAC TCGACTTCGA ACGCTGCATG CTGAAGCTCT CGACCTTTTT CAAGCTGAAC CTCAAAAACA CCCGGTTCAG GCAGTGCGAC CTGCATGAGG CTGACTTTAC GGAAGCCGAC CTCACCGGTG CGTTTTTCGG GGAAAGCGAT CTCCTGCAGG CGATATTTTT TCACACGAAC CTCGAAAAAG CGGATTTCCG CACGGCTTTC AACTACTCCA TCAACCCCGA AACCAACCGC CTCCGAAAAG CGAGGTTCTC CCTGCCGGGA GTGATCGGCC TGCTCGATAC CTACGGCATC GAGATCGAGT AG
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Protein sequence | MKQENTELTE NGIFENIVFD SENPARGMYE ECRFLRCGFA NADLSGVTFR NCAFDGCDFS LAKLNNTSLQ DVRFRECKLL GLQFGDCRTF LLELDFERCM LKLSTFFKLN LKNTRFRQCD LHEADFTEAD LTGAFFGESD LLQAIFFHTN LEKADFRTAF NYSINPETNR LRKARFSLPG VIGLLDTYGI EIE
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