Gene Clim_1398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1398 
SymbolrpsP 
ID6356169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1503575 
End bp1503976 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content50% 
IMG OID642669009 
Product30S ribosomal protein S16 
Protein accessionYP_001943437 
Protein GI189346908 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0228] Ribosomal protein S16 
TIGRFAM ID[TIGR00002] ribosomal protein S16 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000212857 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTTAAGA TCAGACTTAA AAGAACCGGA AGAAAAAAAT TGCCGTTTTA CCAGATTGTC 
GCTGCCGACT CACGTGCACC GAGAGATGGC AAGTTTCTGG AAATTGTAGG CCACTACCAG
CCAACAGCGA AACCGCATGC CGTCACAATC AAGAAAGACC GCGTTTCATA CTGGATGCAG
ACCGGTGCAC AGCCGACTGA CACCGTGCGC AGTCTCATCC GTTCTACGGG TCTTCTTCAT
GAATTGAGAC TTCGCAGCCT TGGTCGCAGT GAAGCTGATA TTACCGCCGA AATGGAAAAG
TGGCAGCAGA ATCAGACTGA AAGACGCCAG AAACGTCTTG CCGTTAAAAC CCGTCGTCGT
CAGGCCAAAA AAGCCGCAGA AGCAAAAGGC GCCGAAGCTT AA
 
Protein sequence
MVKIRLKRTG RKKLPFYQIV AADSRAPRDG KFLEIVGHYQ PTAKPHAVTI KKDRVSYWMQ 
TGAQPTDTVR SLIRSTGLLH ELRLRSLGRS EADITAEMEK WQQNQTERRQ KRLAVKTRRR
QAKKAAEAKG AEA