| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1391 |
|---|
| Symbol | |
|---|
| ID | 6356162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | + |
|---|
| Start bp | 1497560 |
|---|
| End bp | 1499392 |
|---|
| Gene Length | 1833 bp |
|---|
| Protein Length | 610 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642669002 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_001943430 |
|---|
| Protein GI | 189346901 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGACTCA TCAACGCTGA TTTTCATACG TTACCTGAAC TGTTCTCTTC CGTTTTCAGT
CACTATCGAG GCAAAAAAGA GAAGTTTCCC ATTGCCAGGA AGATCAATGG GGTCTATGAA
CCCATACCAT ATGATTCTCT GGAACAGGAT GTTCAATATT TTGGAGCATT TCTCAGGGAA
AACGGCATAA GCCCAAAAGA CCGGGTAGCC ATTCTCTCGG AAAACCGGCC GGGGTGGTAC
CTTGCCGATA TGGCCATCCT CAATATCGGC GCGATCGACG TACCGCTTTA CCCCTCTCTT
CCGCCTAACC AGATCGAATA CATTCTGCGC AACTGCAGCG CGAAAGGCAT TGTTGTCTCG
AACATGCTCC AGCTCGGCAA AATCCTCTCC ATATGGCAGA ACCTCCCCGA CCTGAATCTG
GTCATCGTCA TGAACCGTCT CGAAGAGCCC ATTGAGGATG TGATCGACCT GAATCGCGTA
AAAGAGGCCG GCAGTAAAAT TCTTGACAGC AAGCCCTGGA TTCTTGACGG CATCAAGGTG
GAACCGGACG ACACCGCAAC GATTATCTAT ACTTCCGGCA CTACCGGTCT TCCGAAAGGA
GTCATGCTTA CGCATGGCAA CCTCTGCGAA AACGTCAAAT CCTGCTCCTC GGTTATCCGG
CTCGACGAAA CAGACTGCAG CCTCTCTTTT CTCCCGCTCT CCCACGCATA TGAGCGTACA
GGCGGGTACT ATCTCCTGTT CGCCTGCGGT GCCGCCATCT ATCTGGCCGA AAGTATCGAA
ACCATATCGC TCAATATTGC CGAAGCAAAA CCAACCATCA TCTTTACGGT CCCTCGCCTG
TTCGACAGAA TGAAGGCAAA CATGCTCAAA CAGATTTCCA GCGAAAGCGC AATCAAACAG
AAAATTTTCA ACTGGGCCGT TAAAACCGGT GAACAGTACC ATCGCCAGGT GAACGAGAAA
AACCGTGCAT CGATAACACT TTCCATACAG CACAATCTGG CCGACAAGCT CGTGTACCAC
AAGATCCGCA AAAAATTCGG CGGCCGCCTG CGCTACTTCG TATCAGGCGG CGCTGCCCTG
CCGCAGAAAA TCGGAGAGTT TTTTCAGGCT CTCGGCATCA ACATTCTCGA AGGGTTCGGT
CTGACGGAAA CCTCGCCGGT AACGAACGTC AACCGCCCTG ATAAAATAAA GTTCGGCACT
GTAGGACCGG CAGTGAAAAA TGTTCAGGTA AAAATAGCCG AAGACGGAGA AATCCTGCTC
AAAGGCCCGA ACATTATGAA AGGATACTGG CAGGACGAAA CCGCAACAAA AGAAGTCATC
AGGGACGGAT GGTTTTACAG CGGCGATATC GGTGAAATCG ATCGCGACGG CTACCTGAAA
ATCACCGACC GGAAAAAACA TATCATCGTC ACCTCGGGGG GGAAAAACAT CGCCCCTCAG
CCGATCGAAA ACCTGATCAT TGAAAGCGCT TTTGTCGATC AGGTCATCGT AATCGGAGAA
AAACGCCCAT TCCTTATTGC CGTCATCGTA CCCGATTTCG TCAAGCTCAA CGAGTATGCA
GCGCAGAACT CGATTTCGGC TAAAACCAAC AAAGAGCTGA TCGAGAACAA GGCCATACAG
CAGATTTACG AAAAACTCAT GCGCAACATC TCCCGACAGC TCGCCACACA CGAAAAAGTG
CGCAAATTCC TGCTGATCGA AGAGGCATTC AGCATCGAAA AGGGCAACAT GACCCCTACC
ATGAAACTGA AACGCAAGAC CATAACGGAG AAATACGCGC AGGAGATCGA CAAGGTTTAC
AACGCCCTGA ACATGGTTTA CAACACCGAG TAG
|
|---|
| Protein sequence | MGLINADFHT LPELFSSVFS HYRGKKEKFP IARKINGVYE PIPYDSLEQD VQYFGAFLRE
NGISPKDRVA ILSENRPGWY LADMAILNIG AIDVPLYPSL PPNQIEYILR NCSAKGIVVS
NMLQLGKILS IWQNLPDLNL VIVMNRLEEP IEDVIDLNRV KEAGSKILDS KPWILDGIKV
EPDDTATIIY TSGTTGLPKG VMLTHGNLCE NVKSCSSVIR LDETDCSLSF LPLSHAYERT
GGYYLLFACG AAIYLAESIE TISLNIAEAK PTIIFTVPRL FDRMKANMLK QISSESAIKQ
KIFNWAVKTG EQYHRQVNEK NRASITLSIQ HNLADKLVYH KIRKKFGGRL RYFVSGGAAL
PQKIGEFFQA LGINILEGFG LTETSPVTNV NRPDKIKFGT VGPAVKNVQV KIAEDGEILL
KGPNIMKGYW QDETATKEVI RDGWFYSGDI GEIDRDGYLK ITDRKKHIIV TSGGKNIAPQ
PIENLIIESA FVDQVIVIGE KRPFLIAVIV PDFVKLNEYA AQNSISAKTN KELIENKAIQ
QIYEKLMRNI SRQLATHEKV RKFLLIEEAF SIEKGNMTPT MKLKRKTITE KYAQEIDKVY
NALNMVYNTE
|
|---|
| |