Gene Clim_1311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1311 
Symbol 
ID6354504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1411571 
End bp1412560 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content55% 
IMG OID642668926 
Producthypothetical protein 
Protein accessionYP_001943356 
Protein GI189346827 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00216009 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAAAC TATTGAACGC CATACGCCGG CGATGGTTAC TGCTGCTTAT TTCCGGAATC 
GTTCCGGCGA CCCTTTTTTT TATCCTGAAA CCAAGGAACC TTCCGAAGCT CGTCTCATAT
CCGCATCCCG CTGAAGGCTA TGCTTCGGCG GCTCGCCGTG CCGAAAATTT CGGCGTTCAG
GGAAAGAAAC TGATGAATCC GCTTTGCCGG CTCGAAATGA TGTCCCATAA ACGGAAAACC
TCGCGTGCCG TCATACTTGT TCACGGTTAT ACGAGTTGTC CGCAACAGTT TCATGAGCTT
GGAAAACGTT TTTTCGAGCT TGGAGATAAT GTGCTGATCG CTCCGCTCCC GCATCATGGG
TTGGCTTATC GCTTGACGGA AGATCAGGCC CGGCTCGGCG CGGAAGAACT GGCGGCTTAT
GCCGATGAGG TTGTCGATAT CGCCCGGGGT TTGGGAGATC GGGTAGTGAT GATAGGCATA
TCCGCGGGGG GCGTAACTAC GGCCTGGGCT GCGCAGTACC GCAGTGATAT CGACCTTGCC
GTGATCATCT CTCCGGCGTT CGGGTTCAAG GAGATTCCCG TTCCGCTGAC TGCCGCAGTC
ATGAACATGT ACTCCCTGTT GCCGGATTCA TGGAGCTGGT GGGACGAGAA TCTGAAAGAG
AACGTTCCGC CGGCTTACGC CTATCCCCGC TATTCAAGGC GTGCACTTAC CGAAATTCTG
CGCCTCGGCT TCGTGGTCGA GCAGGCTGCC GGGAAGCATC CTCCCGCCGC TAAAAAGATC
GTCATGGTCT TTAACCCCAA CGATGGCTCC ATCAGCAATG AACGTACCCT GCAGATCGTC
GAACGCTGGA AGGCGCAACA GGCAACCGTC GATTCCTTTA CGTTTGACGC ATCCCTGAAT
CTCGGCCACG ACATCATCGA TCCCAACCAG CCGGATCAGA AGGTCGATAT CGTCTATCCG
AAGCTGATCG AGCTTTGCGG GGGAGAGTGA
 
Protein sequence
MHKLLNAIRR RWLLLLISGI VPATLFFILK PRNLPKLVSY PHPAEGYASA ARRAENFGVQ 
GKKLMNPLCR LEMMSHKRKT SRAVILVHGY TSCPQQFHEL GKRFFELGDN VLIAPLPHHG
LAYRLTEDQA RLGAEELAAY ADEVVDIARG LGDRVVMIGI SAGGVTTAWA AQYRSDIDLA
VIISPAFGFK EIPVPLTAAV MNMYSLLPDS WSWWDENLKE NVPPAYAYPR YSRRALTEIL
RLGFVVEQAA GKHPPAAKKI VMVFNPNDGS ISNERTLQIV ERWKAQQATV DSFTFDASLN
LGHDIIDPNQ PDQKVDIVYP KLIELCGGE