Gene Clim_1272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1272 
Symbol 
ID6355373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand- 
Start bp1374518 
End bp1375168 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content53% 
IMG OID642668888 
Productpeptidase M15D vanX D-ala-D-ala dipeptidase 
Protein accessionYP_001943318 
Protein GI189346789 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2173] D-alanyl-D-alanine dipeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGCTGT ATATACCCGA AATGAAACAG GCGTTCATCG TTTTTCTGAT GCTTCTGCTG 
CCTGTCAGGG AGAGTTTCGC AAGAGAGCCT GATATGATGT TCGCCGACCT GGCGGATTAT 
GACGCATCGA TTATTTTCGA CATCCGTTAC GCGACGACCA GCAATTTTAC CGGCAAAAAG 
GTTTATCCGG CAGCAAGGTG TCTCTTGCGT CGCGATGTCG CCATGCGGTT GTTGAAGGTA 
CAGGAAAAGC TTCGGGCAAA GGGTTACCGG CTGATCGTTT TCGACTGTTA TCGTCCGTTG 
TCGGTACAGA AGCATTTTTG GGCTATACTT CCCGATAAAC GCTATGTGGC CGATCCGGCT 
GAAGGGTCAC GCCACAATCG CGGCGCTTCC GTCGATGTGA GCCTTGCCGA CAGCACCGGG 
AAGCCTCTGG AGATGCCTTC GGGTTACGAT GATTTCTCGG AAAAGGCGAC GAGAGGATGG 
ACAGGTTCTT CCGCCACTGC CCGCCGTAAC TGCGGATTAC TCGATACAGC CATGAAGGAG 
GAGGGGTTTG AACCTTTTTC CGGAGAGTGG TGGCATTTTG ACGCTGCCGG ATGGGAACTG 
TACCCGGTTT CGGATTTTCC TCTCGAGAAA ACCGGCGGCT GCGAAGAGTG A
 
Protein sequence
MKLYIPEMKQ AFIVFLMLLL PVRESFAREP DMMFADLADY DASIIFDIRY ATTSNFTGKK 
VYPAARCLLR RDVAMRLLKV QEKLRAKGYR LIVFDCYRPL SVQKHFWAIL PDKRYVADPA 
EGSRHNRGAS VDVSLADSTG KPLEMPSGYD DFSEKATRGW TGSSATARRN CGLLDTAMKE 
EGFEPFSGEW WHFDAAGWEL YPVSDFPLEK TGGCEE