Gene Clim_1258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1258 
Symbol 
ID6355359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1359345 
End bp1359779 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content49% 
IMG OID642668874 
Productsugar-phosphate isomerase, RpiB/LacA/LacB family 
Protein accessionYP_001943304 
Protein GI189346775 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0000876493 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTG CAGTTGGTAG CGATCACGCT GGTTTTGAAC TCAAAAACTA TGTCGTCCAG 
TGGCTTCAGG AAAACGGCCA TGAGCCTGTT GATATGGGCC CTTTCAATGA AGAGTCGGTT
GATTATCCTG ATTACGCCAG AAAAGTAGGC GAAAGCATCG TGGACGGCAC CTGTCAGGAG
GGAGTTCTCT TATGCGGAAC CGGTATCGGC GTTTCGATTT CGGCGAACAA GGTGAAGGGC
ATACGAGCCG CTCTGGCCTG CAGGCCTGAA TTCGCAACAC TTGCACGGCA GCATAATAAT
GCAAATATTA TCTGTTTCTC TGCCCGGTTT ACCGACAGGG AAACCATTGC GAAAAGTCTT
GAAAACTGGT TTGCCGCTGA TTTTGAAGGC GGAAGACATG AAAGAAGGGT CAATAAAATC
GAACCATGCT GCTGA
 
Protein sequence
MKIAVGSDHA GFELKNYVVQ WLQENGHEPV DMGPFNEESV DYPDYARKVG ESIVDGTCQE 
GVLLCGTGIG VSISANKVKG IRAALACRPE FATLARQHNN ANIICFSARF TDRETIAKSL
ENWFAADFEG GRHERRVNKI EPCC