Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1258 |
Symbol | |
ID | 6355359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 1359345 |
End bp | 1359779 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642668874 |
Product | sugar-phosphate isomerase, RpiB/LacA/LacB family |
Protein accession | YP_001943304 |
Protein GI | 189346775 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family [TIGR01120] ribose 5-phosphate isomerase B |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0000876493 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATTG CAGTTGGTAG CGATCACGCT GGTTTTGAAC TCAAAAACTA TGTCGTCCAG TGGCTTCAGG AAAACGGCCA TGAGCCTGTT GATATGGGCC CTTTCAATGA AGAGTCGGTT GATTATCCTG ATTACGCCAG AAAAGTAGGC GAAAGCATCG TGGACGGCAC CTGTCAGGAG GGAGTTCTCT TATGCGGAAC CGGTATCGGC GTTTCGATTT CGGCGAACAA GGTGAAGGGC ATACGAGCCG CTCTGGCCTG CAGGCCTGAA TTCGCAACAC TTGCACGGCA GCATAATAAT GCAAATATTA TCTGTTTCTC TGCCCGGTTT ACCGACAGGG AAACCATTGC GAAAAGTCTT GAAAACTGGT TTGCCGCTGA TTTTGAAGGC GGAAGACATG AAAGAAGGGT CAATAAAATC GAACCATGCT GCTGA
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Protein sequence | MKIAVGSDHA GFELKNYVVQ WLQENGHEPV DMGPFNEESV DYPDYARKVG ESIVDGTCQE GVLLCGTGIG VSISANKVKG IRAALACRPE FATLARQHNN ANIICFSARF TDRETIAKSL ENWFAADFEG GRHERRVNKI EPCC
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