Gene Clim_1202 details

Gene Information

• Locus tag: Clim_1202
• Symbol: mscL
• ID: 6353719
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: +
• Start bp: 1297093
• End bp: 1297545
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 642668818
• Product: large-conductance mechanosensitive channel
• Protein accession: YP_001943248
• Protein GI: 189346719
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.00425466
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTAAAG AGTTCAGGGA ATTTGTCCTT CGCGGCAATG TAGCCGATAT GGCTGTCGGT 
ATCATTATCG GGGGTGCTTT CGGAGCTATT GTCAATACTC TTGTGTCAGA CGTGCTCATG 
CCTCCGCTTG GCCTCCTGAT CGGGGGGATA GATTTTTCGA ATTTCTATCT GGTACTCAAG 
GAGGGTTCAG CACCAGGTCC ATATGCGGCT CTTGCCGACG CAAAGGCCGT CGGGGCGGTC 
ACCGTAAACT ACGGCATTTT TCTGAACGCT CTTATCAGTT TCATGATTAT GGCATTTGCG 
GTATTCATGC TTATCAAATC CCTCACCTCG ATGCGCGGCA AGCCTGAACC GCCGGCACCG 
GCACCGGCCG TCAAGGAGTG TCCGTATTGC TGCAGCACCA TCCCTCTCAA GGCATCCCGT 
TGTCCAGAGT GTACATCGCA GCTTGAAAAA TAA 

 

Protein sequence

MLKEFREFVL RGNVADMAVG IIIGGAFGAI VNTLVSDVLM PPLGLLIGGI DFSNFYLVLK 
EGSAPGPYAA LADAKAVGAV TVNYGIFLNA LISFMIMAFA VFMLIKSLTS MRGKPEPPAP 
APAVKECPYC CSTIPLKASR CPECTSQLEK