Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1180 |
Symbol | |
ID | 6353696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 1274292 |
End bp | 1275335 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642668796 |
Product | Endonuclease/exonuclease/phosphatase |
Protein accession | YP_001943227 |
Protein GI | 189346698 |
COG category | [R] General function prediction only |
COG ID | [COG2374] Predicted extracellular nuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.494829 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAT CCATAACCTG CATCCTCCTC ATTTACACTG TTTTAGTTCT TCATTCCATA AAAATCCATG CCGGAGAACA AAAAAACGAC TCCCTGCTGC TGATGTGGTG GAACGTTGAA AATCTTTTCG ATACTCATAA CGACCCTGAC ATCGATGATG AGGAATTCAC TCCGGAAGGC AGAAACCATT GGACGCAAAA AAAACTCGCG CTCAAACGCC TCCGCATAAA ACAGGTGCTC GACAGCATCA ATACTTCGCC GGAATATAGA CGATACCCCG ATATTCTTGC CTTTGCAGAG ACAGAAAACC GCACGGTTTT TGCTGGCATA CTCAAGGAAA TCGGCAGCTC CCCCTACAAA ACCCTGTATA TTGAATCGCC CGACAAACGA GGCATCGATA TCGGTCTTGC CTATAACCCT CAAACCGTAA GGCTGATCTC ATCGAAATTC TATATCGTGC CTGTCGGAAA CGACAAACCG ACCCGACACA TTATCATTGC AGGTTTTTCT GCAGGAGGAC ACCCTTTCCG TCTCATGCTC AACCACTGGC CATCCAGAGC CTTCGACAAG GAGTGGACCG AACAAAAACG TATAACGGCA GCAAAAACCG CCCGTCATAT CGCAGACAGC CTTCGCCGCA CTGATGCAAC AATCGACCTC ATCATTATGG GCGATTTCAA CGATGAACCC GAAAACCGTT CGATCAAACA GGTGCTCGGC TCATCAGGAG ATGCTGCAAG GGTCAGAAGA GCCTGCTCCG ACCTGCTCTA TAACTGCTGG AGCGGCTACT CTGGTATCGG CAGCTACTCT TATCGCAATA ACTGGGAACG GATCGATCAG ATTCTGCTCT CGTGCGGCAT GCTCCAAAAG AAAGGGCTCT CTATATCCCA TAACGCTTTC CGTTGTTTTT ATTTCCCGAA CATGCTCGCC CAATCAGCAA ACAGACCGTA CTCAACCTAC CATAAGGGGA AATACAAGGG CGGATACTCC GATCATCTCC CGCTGCTGCT CAAAGTCGAT ATTGAATCAG CAAAAAAGCG ATAA
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Protein sequence | MKKSITCILL IYTVLVLHSI KIHAGEQKND SLLLMWWNVE NLFDTHNDPD IDDEEFTPEG RNHWTQKKLA LKRLRIKQVL DSINTSPEYR RYPDILAFAE TENRTVFAGI LKEIGSSPYK TLYIESPDKR GIDIGLAYNP QTVRLISSKF YIVPVGNDKP TRHIIIAGFS AGGHPFRLML NHWPSRAFDK EWTEQKRITA AKTARHIADS LRRTDATIDL IIMGDFNDEP ENRSIKQVLG SSGDAARVRR ACSDLLYNCW SGYSGIGSYS YRNNWERIDQ ILLSCGMLQK KGLSISHNAF RCFYFPNMLA QSANRPYSTY HKGKYKGGYS DHLPLLLKVD IESAKKR
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