Gene Clim_1154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1154 
Symbol 
ID6353670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1250981 
End bp1251634 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content50% 
IMG OID642668771 
Productglycosyl transferase family 2 
Protein accessionYP_001943202 
Protein GI189346673 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACGTT TTACCAACCT GCCGGAAATA TCCGTCATAC TGCCAGCTTT TAACCGTGCA 
TATCTGCTGC AAAAAGCCAT AGAAAGCGTA TTGGCGCAGA CCTTTCGCGA CTGGGAACTC
ATTATCGTGG ACGACGGGAG CTCCGACAAC ACTTTCGGCG TCGTGAATCC ATACATCGAA
CAACACGACG CCATCCGTTA TCTGAGGCAC AGCAACAGGA AGCTCAACAT GACTCGAAAT
GCCGGAATCC AGGCGGCTTT CGGCACCTGG ATAACCTTTC TCGACAGCGA CGACAGCTAT
GCACCCCTTC ATCTGGAAAG CCGGATTGAA TTCATGCGGA AAAACCCTGA AATCGACCTG
ATTGCGGGAG GGTTCAGCAC AGAAGGCGAC ATTTTCGTCA GGGACTGCTA TGATCCTGCA
AACATGATTA ATATCCGGGA TTGCATTGTC GGACCTACCC TTTTCGGAAA ACGTGATGTT
TTTCTCACGC TTGACGGCTT CAAACCCCTC GCCTATGCCG GAGAAACCGA ACTCTGGGCC
AGAGCTGAAT ACCTGTTCAG GCTTCGTAAA ATCGAAGATC CCAAAACTTA TATATACACC
CGAGCGGACG ACAGCATCAC AAAAAACTTC CCCTCTGATT TTCAACCCGG ATGA
 
Protein sequence
MIRFTNLPEI SVILPAFNRA YLLQKAIESV LAQTFRDWEL IIVDDGSSDN TFGVVNPYIE 
QHDAIRYLRH SNRKLNMTRN AGIQAAFGTW ITFLDSDDSY APLHLESRIE FMRKNPEIDL
IAGGFSTEGD IFVRDCYDPA NMINIRDCIV GPTLFGKRDV FLTLDGFKPL AYAGETELWA
RAEYLFRLRK IEDPKTYIYT RADDSITKNF PSDFQPG