| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1151 |
|---|
| Symbol | |
|---|
| ID | 6353667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 1248571 |
|---|
| End bp | 1249260 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642668768 |
|---|
| Product | MIP family channel protein |
|---|
| Protein accession | YP_001943199 |
|---|
| Protein GI | 189346670 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
|---|
| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAT ATGCAGCAGA GTTCTTCGGA ACATTCTGGC TTGTGCTTGG AGGATGCGGA
AGCGCCGTAC TTGCCGCAGC TTTTCCCGAT GTCGGTATCG GACTTCTCGG TGTCTCACTG
GCATTTGGAC TGACCGTTCT GACAATGGCC TATGCCATCG GTCACATCTC GGGCTGCCAT
TTAAACCCCG CTGTCTCCAT AGGCCTCTGG GCCGGAGGTC GCTTTCCCGC AAACCAGTTG
CTGCCCTATA TAGCCGCTCA GGTTATCGGC GCGGTGGCTG CCGGCGGAGT GCTCTTTCTT
ATCGCAAGTG GCAAGGCAGG TTTTGACGTT TCGGCAGGAT TTGCATCAAA TGGCTATGGC
GCCCATTCTC CCGGAGGCTA CTCCCTGGTT TCTGCACTGG TAACAGAGAT CGTCATGACC
ATGATGTTTC TCATCGTCAT TCTTGGCGCT ACCGACGACC GCGCCCCAAA AGGGTTCGCC
CCGGCAGCTA TAGGACTCTG CCTTACCCTC ATACACCTTA TCAGCATTCC GGTCACCAAC
ACCTCGGTCA ATCCGGCACG CAGCACAGGC GTTGCGCTCT TCGCAGGTGA TTGGGCAATT
TCGCAGCTTT GGGTTTTCTG GGCAGCACCG ATTGCCGGCG CCCTTATCGG AGCCGTCGTT
TACCGATTCA TAGGAGCAGA AAAGCAGTAA
|
|---|
| Protein sequence | MNKYAAEFFG TFWLVLGGCG SAVLAAAFPD VGIGLLGVSL AFGLTVLTMA YAIGHISGCH
LNPAVSIGLW AGGRFPANQL LPYIAAQVIG AVAAGGVLFL IASGKAGFDV SAGFASNGYG
AHSPGGYSLV SALVTEIVMT MMFLIVILGA TDDRAPKGFA PAAIGLCLTL IHLISIPVTN
TSVNPARSTG VALFAGDWAI SQLWVFWAAP IAGALIGAVV YRFIGAEKQ
|
|---|
| |