Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1145 |
Symbol | |
ID | 6353661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 1241978 |
End bp | 1243399 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642668762 |
Product | Endonuclease/exonuclease/phosphatase |
Protein accession | YP_001943193 |
Protein GI | 189346664 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0301783 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGTTT ACTCGTCACT CAGGATCAGG GAAAACGATG CCGGACACAT CAAGGCCTGG AAAAAAAGAA CCGCAGAGAA GCTGCTTCTG CTGCGTGCGG CGCTCGATAC CCATATCGCC GATGCTTCAG GGGAGGAGTC TGCCGAACGC GCCTGCGAAA GGAACGGACG GCAATGGCTG AGACTTGCCA CATGGAATAT CCGCGAGTTC GATACGTTAA AATATGGTGG TCGTCTCAAG GAGTCACTCT ATTTTATTGC TGAAATAATT TCGCATTTCG ATATCGTAGC GCTTCAGGAA GTTCGTGAGG ACCTTGCCTG CCTGCAGTCG GTCGTACAGT TTCTCGGTCA GCATGAGTGG GATTATATCG CAACAGACGT TACCGAGGGC TCTTCGGGAA ACCGGGAACG TATGGTGTTT ATCTACCAGA AAAACCGGGT GCGTTTCACC AGCATAGCGG GCGAGGTGAT GCTTGACAAA GGCGATCTGG TCACCGATTC TTCCGGCTTG TGCTTTCGCG ACGCTTCGGG GCTGAAAGTG GAGTTTCCTG AAGGTGTTAC GCTTTTGCCT TCCGGCGATG TTCCTGTTAT AAAAAGAAAA GGCAAGGTGC TGCTGGAGGA CGATCTGGTG ATTCCTCTTC CCGCCGGTAC CAGGATAGTT TTGCCTGAAG GAAGTTCGCT TGTTCTGCCC GGCGGCACTC AGCTTCCTGT TGAAAACGGT CAGGTCGCCC TGGATGCAGC TTCGCATCAG GCATGGTCGC CTCATGCGCT GGTCCGACCG CCGTATGATC TTCTTTCGGG TATCGGCCTG CAGTTCGCAC GTTCACCTTT TCTTGTCACC TTCCAGGCTG GCTGGCTGAA ATTCATTCTC TGTACCGTCC ATATCTACTA TGGAACGGGC AAGGAAGGGC TGGCCAGGAG AAACGAGGAG ATCAGGAAAC TAACCCGTTT TCTTTCACGG AGGGCCGAAA GCGAGCATGA TTCCGATGCA GAAAACTTCT TTTTCGTGCT CGGAGATTTC AATATTGTGG GAAAGAAACA TGTGACCTGG GAGTCGCTGC ATTCGAACGG TTTCAGGGTT CCCGAACAGC TTCAGAAGAT TCCTGCCGGC AGCAATGCGG CACGCGACAA GGCGTATGAC CAGATCGCCT TCTGGCAACC GACGGCAGCG GGGCATCCCG GCACTACCTT CATCGATGTG GGTAATGCCG GCATTTTCGA TTACTTCAAG TATGTGTTCC GCTGGGGGGA CGATGATCAC GACGGAGAAG ACGAACGGTA CTATGCTGAA AAAACAAAAA CACACAAGCT TGCCTACAAG GAGTGGAGAA CCTATCAGAT GTCGGATCAT CTGCCCATGT GGATAGAGTT GAGAACCGAT TTCGGTACCG ACTACCTTTC GGCGGTTTCC GCCTCCGACT GA
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Protein sequence | MPVYSSLRIR ENDAGHIKAW KKRTAEKLLL LRAALDTHIA DASGEESAER ACERNGRQWL RLATWNIREF DTLKYGGRLK ESLYFIAEII SHFDIVALQE VREDLACLQS VVQFLGQHEW DYIATDVTEG SSGNRERMVF IYQKNRVRFT SIAGEVMLDK GDLVTDSSGL CFRDASGLKV EFPEGVTLLP SGDVPVIKRK GKVLLEDDLV IPLPAGTRIV LPEGSSLVLP GGTQLPVENG QVALDAASHQ AWSPHALVRP PYDLLSGIGL QFARSPFLVT FQAGWLKFIL CTVHIYYGTG KEGLARRNEE IRKLTRFLSR RAESEHDSDA ENFFFVLGDF NIVGKKHVTW ESLHSNGFRV PEQLQKIPAG SNAARDKAYD QIAFWQPTAA GHPGTTFIDV GNAGIFDYFK YVFRWGDDDH DGEDERYYAE KTKTHKLAYK EWRTYQMSDH LPMWIELRTD FGTDYLSAVS ASD
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