Gene Clim_1071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1071 
Symbol 
ID6355713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1174303 
End bp1175586 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content58% 
IMG OID642668688 
ProductABC transporter related 
Protein accessionYP_001943119 
Protein GI189346590 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGAGC ATAGACCATC ACATAGTCCG GCGCTTTCGT TCAGGGATGT TTCCTCGGGG 
TACCGGGGGC GGGAGGTTCT GCACGGAGTG AGTTTCACCG TTGCCGAAGG TGAGTTCGTG
TCGCTTATCG GTCCTAACGG ATGCGGCAAG AGCACACTCC TGAAAACCGC AGCCGCTCTT
ATCAGGCCGG TTTCCGGTTC GGTTTCGTTA TTCGGACGAC CGGCAGAGCG CCTCAAGGCA
GCAGAACGGG CTTCGCTTGT CGGGGTTGTG CCGCAGAAGA TCGAGTCTCC CATGGCATTC
AGGGTCGGCG AACTGGTCAT GAATGGCAGA ATCAGCTCCA TCGGGCTGTT CGGCAGACCA
GGCACCGCTG ATGAAGATAT TGTCGAGCGG GCGATGATCT ATACCGATGT ACTCTCCCTT
CGTGACCGTT ACTTCATGGA GTTGAGCGGC GGCGAGCAGC AGCGGGTCGC CCTCGCCATG
GTGCTTGCCC AGGAGCCGCG CATCATCATG CTCGACGAGT CGATAGCCCA TCTCGATATC
AACCATCGTC AGGAGGTGCT GCAGATTCTG TTGAACATCA ACCGTGAGCA GCGCATTACG
GTGATGCTGG TCAGCCACGA CCTTACGCTT TCCGCGCAGC TTTCCGACCG TCTTCTGCTT
CTCGATAACG GAACGCTTGC CGCTGACGGA ACACCGCAGG AGGTACTGCG TCCCGAACTG
CTCAGCCGGA TCTACAATTG CGAGCTGCAG GTAAGGAAAG ATCCCTGGAG CGGAGAGCTG
CAGGTGAGCG GCGATCTCAT CACAGGCCGG CGACGTAAAG CGCTCGACCG CCGGATTCAT
GTTGTGGCAG GCGGCGGAAG TGGTATAGAG CTTTACAGGA GGTTGCTGAT CGAGGGGTAT
GAAGTGACTA CCGGGGTGCT CAACAAGCTC GATTCCGACG CTGAAGCCGC CAGGGCGCTC
CATCTCGATG CCGTTCTCGA ACAGCCGTTT TCGGCGATAG GAAGTGCCTG TTACCGGGAG
GCATCGGTCA TGGCCGGAGC TGCCGATATG GTTGTGGTTA CGGGCGTTCC GTTCGGTTCG
GGCAATCTGG TCAATCTCTC CCTTGCTTCG GAAGCGCTTT CCGCCGGAAA ACCGGTTTTT
CTCGCCGAAG GCATCGGATC CCGCGATTAT ACCGAAGGAA ACGCCGCAGG GCGGAAAACC
GACGAGCTTC TTGCAGATGG AGCGGTAACA TGGAGCTCCA TCCACGAGTT GCTCGCTTAC
CTCCAGAAAT CATTGCAATC CTGA
 
Protein sequence
MIEHRPSHSP ALSFRDVSSG YRGREVLHGV SFTVAEGEFV SLIGPNGCGK STLLKTAAAL 
IRPVSGSVSL FGRPAERLKA AERASLVGVV PQKIESPMAF RVGELVMNGR ISSIGLFGRP
GTADEDIVER AMIYTDVLSL RDRYFMELSG GEQQRVALAM VLAQEPRIIM LDESIAHLDI
NHRQEVLQIL LNINREQRIT VMLVSHDLTL SAQLSDRLLL LDNGTLAADG TPQEVLRPEL
LSRIYNCELQ VRKDPWSGEL QVSGDLITGR RRKALDRRIH VVAGGGSGIE LYRRLLIEGY
EVTTGVLNKL DSDAEAARAL HLDAVLEQPF SAIGSACYRE ASVMAGAADM VVVTGVPFGS
GNLVNLSLAS EALSAGKPVF LAEGIGSRDY TEGNAAGRKT DELLADGAVT WSSIHELLAY
LQKSLQS