| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1068 |
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| Symbol | cobD |
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| ID | 6354718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 1171425 |
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| End bp | 1172390 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642668685 |
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| Product | cobalamin biosynthesis protein |
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| Protein accession | YP_001943116 |
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| Protein GI | 189346587 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.882793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACGATA TGGTAAAACC GGAATATCTG CTTCTTTCAG CGTTCCTTTG CGATCTGCTT
TTCGGGGATC CCCGCTGGAT GCCGCATCCG GTCAAGGGAA TCGGGTGGTT CGCGCATGGC
GCCGAGAAGG CGCTGAGGGC TTCAGGCCTG CCGCTGAGGA TCGCAGGGGT GCTCTGCGTG
CTGGTCGTTG TGGGCGGTAC GGCCGGTTCC GCGTGGCTCG TCATAACGGC TGCCAGCCTG
CTGCACCCCT TTTTAGGCGC TGCTGCGGGT ATGTATCTGC TCTACACCTC CATTGCCGTA
AAAGATCTCG GCGATCATGC CGGCGCGGTT CGTACGGCCC TCGATTCGGG GGATATCGGA
CTTGCCCGTC AGAAGGTTTC CTGGATGGTC GGGCGGGATA CGGACGGGCT CTCGGAGGAT
GATATCGCGC TTGCCGCCAC GGAGAGCGTT GCGGAGAATA CCGTTGACGG GGTGACGGCT
CCTCTTTTTT ACGCGCTGCT TTTCGGGCCG GTCGGCGCGA TTGCATACAA GGCGGTCAAT
ACGCTCGATT CATCGTTCGG ATATCTGAAC GACCGCTACC GGGAATTCGG CTGGGCGTCG
GCAAAACTCG ACGATGTTGC CAACTGGCTT CCTTCGAGAA TTACCGTGCT CGCTATAGCA
TTGGCATCCG CAGTGAAGAG ATTCGGGTTT TTTAATATCT TTAAGGCCGT CAGATGCGGA
GCCCGGCTGC ATGCAAGCCC GAATGCAGGG TATCCTGAAT CGGCCTTTGC GGGCGCGCTC
GGCGTAACCT TCGGCGGCGA GCGGAGCTAT GGGGGCGTTG TGCACGAGGC GCCGCTGCTT
GGAGTTGTCC GCAAAGCCTG TTCGGCGGAT TCGGTGCGCA GGAGTATCGA GCTGATGCGG
TTGACGGCAG TTGTTTTTCT TGCGGCAGGC CTCATGTTGA GGGTGCTTGC AGAGCGATTA
TGGTAA
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| Protein sequence | MNDMVKPEYL LLSAFLCDLL FGDPRWMPHP VKGIGWFAHG AEKALRASGL PLRIAGVLCV
LVVVGGTAGS AWLVITAASL LHPFLGAAAG MYLLYTSIAV KDLGDHAGAV RTALDSGDIG
LARQKVSWMV GRDTDGLSED DIALAATESV AENTVDGVTA PLFYALLFGP VGAIAYKAVN
TLDSSFGYLN DRYREFGWAS AKLDDVANWL PSRITVLAIA LASAVKRFGF FNIFKAVRCG
ARLHASPNAG YPESAFAGAL GVTFGGERSY GGVVHEAPLL GVVRKACSAD SVRRSIELMR
LTAVVFLAAG LMLRVLAERL W
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